Ligand clusters for UniProt code Q79PF4

Ligand clusters for Q79PF4: Circadian clock protein kinase KaiC from Synechococcus elongatus (strain PCC 7942 / FACHB-805)

		Top 6 (of 9) ligand clusters Cluster 1. 8 ligand types 27 ligands Cluster 2. 6 ligand types 34 ligands Cluster 3. 3 ligand types 29 ligands Cluster 4. 3 ligand types 17 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 2gblA

Structures

PDB		Schematic diagram
2gblA
3dvlA
3k0cA
3jzmA
3k0aA
		more ...

Cluster 1 contains 8 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: ATP × 2 Adenosine-5'-Triphosphate PDB codes: 1u9i(A), 2gbl(A).
_Mg		2. Metal: _MG × 2 PDB codes: 3k0a(A), 3k0e(A).
		3. Ligand: ATP × 12 Adenosine-5'-Triphosphate PDB codes: 1tf7(A), 3dvl(A), 3jzm(A), 3k09(A), 3k0a(A), 3k0c(A), 3k0e(A), 3k0f(A), 3s1a(A), 4dug(A), 4ijm(A), 4tl7(A).
		4. Ligand: AGS × 6 Phosphothiophosphoric acid-Adenylate ester PDB codes: 4tl8(A), 4tl9(A), 4tlb(A), 4tlc(A), 4tld(A), 4tle(A).
		5. Ligand: ANP × 2 Phosphoaminophosphonic acid-Adenylate ester PDB codes: 4tla(A), 5yz8(A).
		6. Ligand: ADP × 1 Adenosine-5'-Diphosphate PDB code: 4tla(C).
		7. Ligand: PO4 × 1 Phosphate ion PDB code: 4ijm(A).
_Cl		8. Metal: _CL × 1 PDB code: 5yz8(A).

Cluster 2 contains 6 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: ATP × 2 Adenosine-5'-Triphosphate PDB codes: 1u9i(A), 2gbl(A).
_Mg		2. Metal: _MG × 10 PDB codes: 3jzm(A), 3k09(A), 3k0a(A), 3k0c(A), 3k0e(A), 3k0f(A), 3s1a(A), 4dug(A), 5yz8(A).
		3. Ligand: ATP × 12 Adenosine-5'-Triphosphate PDB codes: 1tf7(A), 3dvl(A), 3jzm(A), 3k09(A), 3k0a(A), 3k0c(A), 3k0e(A), 3k0f(A), 3s1a(A), 4dug(A), 4ijm(A), 4tl7(A).
		4. Ligand: AGS × 6 Phosphothiophosphoric acid-Adenylate ester PDB codes: 4tl8(A), 4tl9(A), 4tlb(A), 4tlc(A), 4tld(A), 4tle(A).
		5. Ligand: ANP × 3 Phosphoaminophosphonic acid-Adenylate ester PDB codes: 4tl6(A), 4tla(A), 5yz8(A).
		6. Ligand: ADP × 1 Adenosine-5'-Diphosphate PDB code: 4tla(C).

Cluster 3 contains 3 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: ATP × 2 Adenosine-5'-Triphosphate PDB codes: 1u9i(A), 2gbl(A).
_Mg		2. Metal: _MG × 16 PDB codes: 1u9i(A), 2gbl(A), 3dvl(A), 3jzm(A), 3k09(A), 3k0a(A), 3k0c(A), 3k0e(A), 3k0f(A), 3s1a(A), 4dug(A), 4ijm(A).
		3. Ligand: ATP × 11 Adenosine-5'-Triphosphate PDB codes: 1tf7(A), 3dvl(A), 3jzm(A), 3k09(A), 3k0a(A), 3k0c(A), 3k0e(A), 3k0f(A), 3s1a(A), 4dug(A), 4ijm(A).

Cluster 4 contains 3 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: ATP × 2 Adenosine-5'-Triphosphate PDB codes: 1u9i(A), 2gbl(A).
_Mg		2. Metal: _MG × 4 PDB codes: 3k09(A), 3k0a(A), 3k0c(A), 3s1a(A).
		3. Ligand: ATP × 11 Adenosine-5'-Triphosphate PDB codes: 1tf7(A), 3dvl(A), 3jzm(A), 3k09(A), 3k0a(A), 3k0c(A), 3k0e(A), 3k0f(A), 3s1a(A), 4dug(A), 4ijm(A).

Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: 52M × 1 2-(6-Hydroxy-3-Oxo-3h-Xanthen-9-Yl)-5- [(Sulfanylcarbonyl)amino]benzoic acid PDB code: 5c5e(G).

Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: 52M × 1 2-(6-Hydroxy-3-Oxo-3h-Xanthen-9-Yl)-5- [(Sulfanylcarbonyl)amino]benzoic acid PDB code: 5c5e(H).