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Ligand clusters for UniProt code Q72IT0

Ligand clusters for Q72IT0: Sulfur oxidation protein soxB from Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)

Top 6 (of 15) ligand clusters
Cluster 1.
4 ligand types
13 ligands
Cluster 2.
3 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
4 ligands
Representative protein: 4uwqA  
JSmol
 

Structures

PDB   Schematic diagram
4uwqA    
2wdfA    
2wdeA    
2wddA    
2wdcA    

 

 Cluster 1 contains 4 ligand types

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Ligand Description

_Mn
 
1. Metal: _MN × 10
PDB codes: 2wdc(A), 2wdd(A), 2wde(A), 2wdf(A), 4uwq(A),


 
2. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2wdc(A).


 
3. Ligand: SO4 × 1
Sulfate ion
PDB code: 2wdd(A).


 
4. Ligand: THJ × 1
Thiosulfate
PDB code: 2wde(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2wdc(A).


 
2. Ligand: ACT × 1
Acetate ion
PDB code: 2wdd(A).


 
3. Ligand: TBU × 1
Tertiary-Butyl alcohol
PDB code: 2wde(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2wdc(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2wdc(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2wdc(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: TBU × 4
Tertiary-Butyl alcohol
PDB codes: 2wdc(A), 2wdd(A), 2wde(A), 2wdf(A).

 

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