Ligand clusters for UniProt code Q72HW2

Ligand clusters for Q72HW2: Laccase from Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)

		Top 6 (of 24) ligand clusters Cluster 1. 6 ligand types 42 ligands Cluster 2. 3 ligand types 14 ligands Cluster 3. 2 ligand types 17 ligands Cluster 4. 2 ligand types 14 ligands Cluster 5. 2 ligand types 65 ligands Cluster 6. 2 ligand types 18 ligands
Representative protein: 6w2kA

Structures

PDB		Schematic diagram
6w2kA
6q29A
5k0dA
5g3fA
5g3dA
		more ...

Cluster 1 contains 6 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 6tyr(A),
		2. Ligand: CIT × 1 citric acid Citric acid PDB code: 6tyr(A).
		3. Ligand: MPD × 28 (4s)-2-Methyl-2,4-Pentanediol PDB codes: 2xuw(A), 2xvb(A), 2yae(A), 2yap(A), 4ai7(A), 5g3b(A), 5g3d(A), 5g3e(A), 5g3f(A), 5jrr(A), 5jx9(A), 5k0d(A), 5k15(A), 5k3k(A), 5k5k(A), 5k7a(A), 5k84(A),
		4. Ligand: 1PE × 6 Pentaethylene glycol PDB codes: 6w9x(A), 6wcg(A), 6wcl(A), 6wcm(A), 6wcn(A), 6wcp(A).
		5. Ligand: MRD × 3 (4r)-2-Methylpentane-2,4-Diol PDB codes: 2yae(A), 2yap(A), 5g3d(A).
		6. Ligand: PG4 × 2 Tetraethylene glycol PDB codes: 6q29(A), 6wch(A).

Cluster 2 contains 3 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 6tyr(A).
		2. Ligand: MPD × 12 (4s)-2-Methyl-2,4-Pentanediol PDB codes: 2xuw(A), 2yae(A), 2yap(A), 4ai7(A), 5jrr(A), 5jx9(A), 5k0d(A), 5k15(A), 5k3k(A), 5k5k(A), 5k7a(A), 5k84(A).
		3. Ligand: MRD × 1 (4r)-2-Methylpentane-2,4-Diol PDB code: 2xvb(A).

Cluster 3 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: MPD × 15 (4s)-2-Methyl-2,4-Pentanediol PDB codes: 2xuw(A), 2xvb(A), 2yae(A), 2yap(A), 4ai7(A), 5g3b(A), 5g3d(A), 5jrr(A), 5jx9(A), 5k0d(A), 5k15(A), 5k3k(A), 5k5k(A), 5k7a(A), 5k84(A).
		2. Ligand: MRD × 2 (4r)-2-Methylpentane-2,4-Diol PDB codes: 5g3e(A), 5g3f(A).

Cluster 4 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: MPD × 12 (4s)-2-Methyl-2,4-Pentanediol PDB codes: 2xuw(A), 2xvb(A), 2yae(A), 2yap(A), 4ai7(A), 5g3d(A), 5jx9(A), 5k0d(A), 5k15(A), 5k5k(A), 5k7a(A), 5k84(A).
		2. Ligand: MRD × 2 (4r)-2-Methylpentane-2,4-Diol PDB codes: 5jrr(A), 5k3k(A).

Cluster 5 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: MPD × 51 (4s)-2-Methyl-2,4-Pentanediol PDB codes: 2xuw(A), 2xvb(A), 2yae(A), 2yap(A), 4ai7(A), 5g3b(A), 5g3e(A), 5g3f(A), 5jrr(A), 5jx9(A), 5k0d(A), 5k15(A), 5k3k(A), 5k5k(A), 5k7a(A), 5k84(A), 6w2k(A),
		2. Ligand: MRD × 14 (4r)-2-Methylpentane-2,4-Diol PDB codes: 2xuw(A), 2xvb(A), 2yae(A), 2yap(A), 5g3b(A), 5g3d(A),

Cluster 6 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: MPD × 10 (4s)-2-Methyl-2,4-Pentanediol PDB codes: 4ai7(A), 5jrr(A), 5jx9(A), 5k0d(A), 5k15(A), 5k3k(A), 5k5k(A), 5k7a(A), 5k84(A), 6w2k(A).
		2. Ligand: MRD × 8 (4r)-2-Methylpentane-2,4-Diol PDB codes: 2xuw(A), 2xvb(A), 2yae(A), 2yap(A), 5g3b(A), 5g3d(A), 5g3e(A), 5g3f(A).