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Ligand clusters for UniProt code Q63T71

Ligand clusters for Q63T71: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Burkholderia pseudomallei (strain K96243)

Top 6 (of 7) ligand clusters
Cluster 1.
5 ligand types
9 ligands
Cluster 2.
5 ligand types
16 ligands
Cluster 3.
1 ligand type
3 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3iewA  
JSmol
 

Structures

PDB   Schematic diagram
3iewA    
3ikfA    
3ikeA    
3q8hC    
3q8hA    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: 717 × 2
Imidazo[2,1-B][1,3]thiazol-6-Ylmethanol
PDB codes: 3ikf(A),


 
2. Ligand: AO9 × 2
5'-Deoxy-5'-[(Imidazo[2,1-B][1,3]thiazol-5-Ylcarbonyl) amino]cytidine
PDB codes: 3q8h(A),


 
3. Ligand: CDP × 2
Cytidine-5'-Diphosphate
PDB codes: 3iew(A),


 
4. Ligand: CYT × 2
6-Aminopyrimidin-2(1h)-One
PDB codes: 3ike(A),


 
5. Ligand: CTP × 1
Cytidine-5'-Triphosphate
PDB code: 3iew(B).

 

 Cluster 2 contains 5 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 9
PDB codes: 3iew(A), 3ike(A), 3ikf(A), 3q8h(A),


 
2. Ligand: 717 × 2
Imidazo[2,1-B][1,3]thiazol-6-Ylmethanol
PDB codes: 3ikf(A),


 
3. Ligand: AO9 × 2
5'-Deoxy-5'-[(Imidazo[2,1-B][1,3]thiazol-5-Ylcarbonyl) amino]cytidine
PDB codes: 3q8h(A),


 
4. Ligand: CDP × 2
Cytidine-5'-Diphosphate
PDB codes: 3iew(B),


 
5. Ligand: CTP × 1
Cytidine-5'-Triphosphate
PDB code: 3iew(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 3
glycerin
Glycerol
PDB codes: 3iew(A),

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: ACT × 2
Acetate ion
PDB codes: 3ikf(A),

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3q8h(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3q8h(A).

 

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