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Ligand clusters for UniProt code Q5ZUA2

Ligand clusters for Q5ZUA2: Ectonucleoside triphosphate diphosphohydrolase I from Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)

Top 6 (of 20) ligand clusters
Cluster 1.
18 ligand types
27 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
2 ligand types
13 ligands
Cluster 5.
2 ligand types
13 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 4bvpA  
JSmol
 

Structures

PDB   Schematic diagram
4bvpA    
4brmA    
4br9A    
4brkA    
4briA    
 more ...

 

 Cluster 1 contains 18 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 4brk(A), 4bvp(A).


 
2. Ligand: ANP × 3
Phosphoaminophosphonic acid-Adenylate ester
PDB codes: 3aar(A), 4bra(A), 4brd(A).


 
3. Ligand: AMP × 2
Adenosine monophosphate
PDB codes: 4brn(A), 4brq(A).


 
4. Ligand: AU1 × 2
5'-O-[(R)-Hydroxy(phosphonoamino)phosphoryl]adenosine
PDB codes: 4br7(A), 4brc(A).


 
5. Ligand: MOO × 2
Molybdate ion
PDB codes: 4brf(A), 4bvp(A).


 
6. Ligand: PO4 × 2
Phosphate ion
PDB codes: 4brq(A),


 
7. Ligand: SO4 × 2
Sulfate ion
PDB codes: 4br9(A), 4brm(A).


 
8. Ligand: UNP × 2
5'-O-[(R)-Hydroxy{[(s)- Hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl] uridine
PDB codes: 4bri(A), 4brk(A).


 
9. Ligand: 50T × 1
Adenosine-5'-Phosphovanadate
PDB code: 4bre(A).


 
10. Ligand: 8M0 × 1
Bis(mu4-Oxo)-Tetrakis(mu3-Oxo)-Hexakis(mu2- Oxo)-Hexadecaoxo-Octamolybdenum (VI)
PDB code: 4bvp(A).


 
11. Ligand: ARU × 1
5'-O-[(R)-{[(R)-[Dibromo(phosphono)methyl](hydroxy) phosphoryl]oxy}(hydroxy)phosphoryl]-N,N-
Diethyladenosine
PDB code: 3aaq(A).


 
12. Ligand: DVT × 1
Decavanadate
PDB code: 4brh(A).


 
13. Ligand: GMV × 1
Guanosine-5'-Phosphovanadate
PDB code: 4brl(A).


 
14. Ligand: GNP × 1
Phosphoaminophosphonic acid-Guanylate ester
PDB code: 4brg(A).


 
15. Ligand: M27-EDO × 1
EDO=1,2-Ethanediol, M27=Cyclodimolybdoxan-2,2,2,2,4,4,4,4-Octol.
PDB code: 4bvp(A).


 
16. Ligand: MO7 × 1
Bis(mu4-Oxo)-Bis(mu3-Oxo)-Octakis(mu2-Oxo)- Dodecaoxo-Heptamolybdenum (VI)
PDB code: 4bvp(A).


 
17. Ligand: TLA × 1
L(+)-Tartaric acid
PDB code: 4bvo(A).


 
18. Ligand: TMV × 1
Thiamine-Phosphovanadate
PDB code: 4brh(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: 8M0 × 1
Bis(mu4-Oxo)-Tetrakis(mu3-Oxo)-Hexakis(mu2- Oxo)-Hexadecaoxo-Octamolybdenum (VI)
PDB code: 4bvp(A).


 
2. Ligand: E43 × 1
12-Polytungstate
PDB code: 4bvo(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: 6LL-GOL-EDO × 1
GOL=Glycerol, EDO=1,2-Ethanediol, 6LL=Tetrakis-(Mu-Oxo)-Deca-Oxo-Trimolybdenum.
PDB code: 4bvp(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: MES × 11
2-(N-Morpholino)-Ethanesulfonic acid
PDB codes: 4bra(A), 4brc(A), 4brd(A), 4bre(A), 4brf(A), 4brg(A), 4brh(A), 4bri(A), 4brk(A), 4brq(A), 4bvp(A).


 
2. Ligand: SO4 × 2
Sulfate ion
PDB codes: 4br9(A), 4brm(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: MES × 11
2-(N-Morpholino)-Ethanesulfonic acid
PDB codes: 4bra(A), 4brc(A), 4brd(A), 4bre(A), 4brf(A), 4brg(A), 4brh(A), 4bri(A), 4brk(A), 4brq(A), 4bvp(A).


 
2. Ligand: SO4 × 2
Sulfate ion
PDB codes: 4br9(A), 4brm(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: M27-EDO × 2
EDO=1,2-Ethanediol, M27=Bis(mu2-Oxo)-Octaoxo-Dimolybdenum (VI).
PDB codes: 4brf(A), 4bvp(A).

 

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