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Ligand clusters for UniProt code Q5ZUA2
Ligand clusters for Q5ZUA2: Ectonucleoside triphosphate diphosphohydrolase I from Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Top 6 (of 20) ligand clusters
Cluster 1.
18 ligand types
27 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
2 ligand types
13 ligands
Cluster 5.
2 ligand types
13 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 4bvpA
Structures
PDB
Schematic diagram
4bvp
A
4brm
A
4br9
A
4brk
A
4bri
A
more ...
Cluster 1 contains 18 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
4brk
(A),
4bvp
(A).
2. Ligand:
ANP × 3
Phosphoaminophosphonic acid-Adenylate ester
PDB codes:
3aar
(A),
4bra
(A),
4brd
(A).
3. Ligand:
AMP × 2
Adenosine monophosphate
PDB codes:
4brn
(A),
4brq
(A).
4. Ligand:
AU1 × 2
5'-O-[(R)-Hydroxy(phosphonoamino)phosphoryl]adenosine
PDB codes:
4br7
(A),
4brc
(A).
5. Ligand:
MOO × 2
Molybdate ion
PDB codes:
4brf
(A),
4bvp
(A).
6. Ligand:
PO4 × 2
Phosphate ion
PDB codes:
4brq
(A),
7. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
4br9
(A),
4brm
(A).
8. Ligand:
UNP × 2
5'-O-[(R)-Hydroxy{[(s)- Hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl] uridine
PDB codes:
4bri
(A),
4brk
(A).
9. Ligand:
50T × 1
Adenosine-5'-Phosphovanadate
PDB code:
4bre
(A).
10. Ligand:
8M0 × 1
Bis(mu4-Oxo)-Tetrakis(mu3-Oxo)-Hexakis(mu2- Oxo)-Hexadecaoxo-Octamolybdenum (VI)
PDB code:
4bvp
(A).
11. Ligand:
ARU × 1
5'-O-[(R)-{[(R)-[Dibromo(phosphono)methyl](hydroxy) phosphoryl]oxy}(hydroxy)phosphoryl]-N,N-
Diethyladenosine
PDB code:
3aaq
(A).
12. Ligand:
DVT × 1
Decavanadate
PDB code:
4brh
(A).
13. Ligand:
GMV × 1
Guanosine-5'-Phosphovanadate
PDB code:
4brl
(A).
14. Ligand:
GNP × 1
Phosphoaminophosphonic acid-Guanylate ester
PDB code:
4brg
(A).
15. Ligand:
M27-EDO × 1
EDO
=1,2-Ethanediol,
M27
=Cyclodimolybdoxan-2,2,2,2,4,4,4,4-Octol.
PDB code:
4bvp
(A).
16. Ligand:
MO7 × 1
Bis(mu4-Oxo)-Bis(mu3-Oxo)-Octakis(mu2-Oxo)- Dodecaoxo-Heptamolybdenum (VI)
PDB code:
4bvp
(A).
17. Ligand:
TLA × 1
L(+)-Tartaric acid
PDB code:
4bvo
(A).
18. Ligand:
TMV × 1
Thiamine-Phosphovanadate
PDB code:
4brh
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
8M0 × 1
Bis(mu4-Oxo)-Tetrakis(mu3-Oxo)-Hexakis(mu2- Oxo)-Hexadecaoxo-Octamolybdenum (VI)
PDB code:
4bvp
(A).
2. Ligand:
E43 × 1
12-Polytungstate
PDB code:
4bvo
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
6LL-GOL-EDO × 1
GOL
=Glycerol,
EDO
=1,2-Ethanediol,
6LL
=Tetrakis-(Mu-Oxo)-Deca-Oxo-Trimolybdenum.
PDB code:
4bvp
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
MES × 11
2-(N-Morpholino)-Ethanesulfonic acid
PDB codes:
4bra
(A),
4brc
(A),
4brd
(A),
4bre
(A),
4brf
(A),
4brg
(A),
4brh
(A),
4bri
(A),
4brk
(A),
4brq
(A),
4bvp
(A).
2. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
4br9
(A),
4brm
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
MES × 11
2-(N-Morpholino)-Ethanesulfonic acid
PDB codes:
4bra
(A),
4brc
(A),
4brd
(A),
4bre
(A),
4brf
(A),
4brg
(A),
4brh
(A),
4bri
(A),
4brk
(A),
4brq
(A),
4bvp
(A).
2. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
4br9
(A),
4brm
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
M27-EDO × 2
EDO
=1,2-Ethanediol,
M27
=Bis(mu2-Oxo)-Octaoxo-Dimolybdenum (VI).
PDB codes:
4brf
(A),
4bvp
(A).