Ligand clusters for UniProt code Q58830

Ligand clusters for Q58830: Uncharacterized protein MJ1435 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

		Top 6 (of 9) ligand clusters Cluster 1. 5 ligand types 17 ligands Cluster 2. 3 ligand types 4 ligands Cluster 3. 2 ligand types 2 ligands Cluster 4. 2 ligand types 2 ligands Cluster 5. 2 ligand types 4 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 4x9cD

Structures

PDB		Schematic diagram
4x9cD
4x9dA
4x9dD
4x9cA
5dy9E
		more ...

Cluster 1 contains 5 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 5dy9(B).
		2. Ligand: U5P × 6 Uridine-5'-Monophosphate PDB codes: 4x9d(A),
		3. Ligand: PEG × 5 Di(hydroxyethyl)ether PDB codes: 4x9c(A),
_Na		4. Metal: _NA × 3 PDB codes: 4x9c(A), 4x9d(A),
		5. Ligand: AMP × 2 Adenosine monophosphate PDB codes: 5dy9(E),

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: PGE × 2 Triethylene glycol PDB codes: 4x9c(A), 4x9d(A).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 4x9d(B).
		3. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 4x9c(B).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 4x9c(A).
		2. Ligand: PG4 × 1 Tetraethylene glycol PDB code: 4x9d(B).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: TRS × 1 tromethamine 2-Amino-2-Hydroxymethyl-Propane-1,3-Diol PDB code: 5dy9(E).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 4x9c(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 4x9c(B),
		2. Ligand: SO4 × 2 Sulfate ion PDB codes: 4x9d(A),

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 5dy9(B).