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Ligand clusters for UniProt code Q56185
Ligand clusters for Q56185: (S)-2-hydroxypropylphosphonic acid epoxidase from Streptomyces wedmorensis
Top 6 (of 12) ligand clusters
Cluster 1.
10 ligand types
24 ligands
Cluster 2.
7 ligand types
11 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
2 ligand types
4 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 2bnmA
Structures
PDB
Schematic diagram
2bnm
A
1zz9
A
1zzb
B
2bno
A
1zzb
A
more ...
Cluster 1 contains 10 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 3
PDB codes:
2bnm
(A),
2bnn
(A),
2bno
(A).
2. Ligand:
FCN × 1
fosfomycin
Fosfomycin
PDB code:
2bnn
(A).
3. Ligand:
TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code:
1zzc
(A).
Fe2
4. Metal:
FE2 × 6
PDB codes:
1zz7
(A),
1zz8
(A),
1zz9
(A),
3scg
(A),
4j1w
(A),
4j1x
(A).
5. Ligand:
S0H × 4
(S)-2-Hydroxypropylphosphonic acid
PDB codes:
1zz7
(A),
1zz8
(A),
1zzb
(A),
_Co
6. Metal:
_CO × 4
PDB codes:
1zzb
(A),
1zzc
(A),
3sch
(A).
7. Ligand:
TB6 × 2
[(2r)-2-Hydroxypropyl]phosphonic acid
PDB codes:
3scg
(A),
3sch
(A).
8. Ligand:
1JJ × 1
[(1s)-1-Hydroxypropyl]phosphonic acid
PDB code:
4j1x
(A).
9. Ligand:
FFQ × 1
[(1r)-1-Hydroxypropyl]phosphonic acid
PDB code:
4j1w
(A).
10. Ligand:
SO4 × 1
Sulfate ion
PDB code:
2bnm
(A).
Cluster 2 contains 7 ligand types
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Ligand
Description
1. Ligand:
FCN × 1
fosfomycin
Fosfomycin
PDB code:
2bnn
(A).
2. Ligand:
TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code:
1zzc
(A).
3. Ligand:
S0H × 4
(S)-2-Hydroxypropylphosphonic acid
PDB codes:
1zz7
(A),
1zz8
(A),
1zzb
(A),
4. Ligand:
TB6 × 2
[(2r)-2-Hydroxypropyl]phosphonic acid
PDB codes:
3scg
(A),
3sch
(A).
5. Ligand:
1JJ × 1
[(1s)-1-Hydroxypropyl]phosphonic acid
PDB code:
4j1x
(A).
6. Ligand:
FFQ × 1
[(1r)-1-Hydroxypropyl]phosphonic acid
PDB code:
4j1w
(A).
7. Ligand:
SO4 × 1
Sulfate ion
PDB code:
2bnm
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4j1w
(A).
2. Ligand:
SO4 × 3
Sulfate ion
PDB codes:
1zz9
(A),
2bnm
(A),
2bno
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
4j1w
(A),
4j1x
(A).
2. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
2bnm
(A),
2bno
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
2bnm
(A),
2bno
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
2bnm
(A),
2bno
(A).