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EBI
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PDBsum
Ligand clusters for UniProt code Q54450
Ligand clusters for Q54450: Hemophore HasA from Serratia marcescens
Top 6 (of 7) ligand clusters
Cluster 1.
4 ligand types
11 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
5 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 2uydX
Structures
PDB
Schematic diagram
2uyd
X
1b2v
A
5c58
B
3csl
C
1dkh
A
more ...
Cluster 1 contains 4 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 1
PDB code:
2uyd
(X).
2. Ligand:
HEM × 8
Protoporphyrin IX containing fe
PDB codes:
1b2v
(A),
1dk0
(A),
1dkh
(A),
2cn4
(A),
2uyd
(X),
3csl
(C),
3ddr
(C),
5c58
(B).
3. Ligand:
ACT × 1
Acetate ion
PDB code:
2uyd
(X).
4. Ligand:
PO4 × 1
Phosphate ion
PDB code:
2cn4
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
HEM × 1
Protoporphyrin IX containing fe
PDB code:
2cn4
(A).
2. Ligand:
PO4 × 1
Phosphate ion
PDB code:
2cn4
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 1
PDB code:
2uyd
(X).
_Sm
2. Metal:
_SM × 1
PDB code:
1dkh
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 2
PDB codes:
1dkh
(A),
2uyd
(X).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 5
PDB codes:
1dkh
(A),
2uyd
(X),
Cluster 6 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 1
PDB code:
2uyd
(X).