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Ligand clusters for UniProt code Q53752
Ligand clusters for Q53752: Ribonuclease from Kitasatospora aureofaciens
6 ligand clusters
Cluster 1.
4 ligand types
10 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 3d5iB
Structures
PDB
Schematic diagram
3d5i
B
3d5i
A
3dgy
A
3d4a
B
1py3
A
more ...
Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
SO4 × 6
Sulfate ion
PDB codes:
1py3
(A),
1pyl
(A),
3d4a
(A),
3d5g
(A),
3d5i
(A),
3dgy
(A).
2. Ligand:
3GP × 2
Guanosine-3'-Monophosphate
PDB codes:
3d4a
(B),
3dh2
(A).
3. Ligand:
2GP × 1
Guanosine-2'-Monophosphate
PDB code:
3dgy
(B).
4. Ligand:
SGP × 1
Guanosine-2',3'-Cyclophosphorothioate
PDB code:
3d5i
(B).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
BGC × 2
Beta-D-Glucopyranose
PDB codes:
3dgy
(A),
3dh2
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
BGC × 1
Beta-D-Glucopyranose
PDB code:
3dh2
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 3
Sulfate ion
PDB codes:
1pyl
(A),
3d5i
(A),
3dgy
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 3
Sulfate ion
PDB codes:
1pyl
(A),
3d5i
(A),
3dh2
(A).
Cluster 6 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
1. Ligand:
SO4 × 3
Sulfate ion
PDB codes:
3d4a
(B),
3dgy
(B).