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Ligand clusters for UniProt code Q53752

Ligand clusters for Q53752: Ribonuclease from Kitasatospora aureofaciens

6 ligand clusters
Cluster 1.
4 ligand types
10 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 3d5iB  
JSmol
 

Structures

PDB   Schematic diagram
3d5iB    
3d5iA    
3dgyA    
3d4aB    
1py3A    
 more ...

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: SO4 × 6
Sulfate ion
PDB codes: 1py3(A), 1pyl(A), 3d4a(A), 3d5g(A), 3d5i(A), 3dgy(A).


 
2. Ligand: 3GP × 2
Guanosine-3'-Monophosphate
PDB codes: 3d4a(B), 3dh2(A).


 
3. Ligand: 2GP × 1
Guanosine-2'-Monophosphate
PDB code: 3dgy(B).


 
4. Ligand: SGP × 1
Guanosine-2',3'-Cyclophosphorothioate
PDB code: 3d5i(B).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: BGC × 2
Beta-D-Glucopyranose
PDB codes: 3dgy(A), 3dh2(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: BGC × 1
Beta-D-Glucopyranose
PDB code: 3dh2(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 1pyl(A), 3d5i(A), 3dgy(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 1pyl(A), 3d5i(A), 3dh2(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 3d4a(B), 3dgy(B).

 

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