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Ligand clusters for UniProt code Q52L64
Ligand clusters for Q52L64: ENSMUSG00000076577 protein from Mus musculus
6 ligand clusters
Cluster 1.
10 ligand types
10 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
4 ligands
Representative protein: 1jguL
Structures
PDB
Schematic diagram
1jgu
L
1q9w
A
3t77
A
2r2h
A
2r1x
A
more ...
Cluster 1 contains 10 ligand types
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Ligand
Description
1. Ligand:
GP1-GP4-KDO-KDO-KDO × 1
GP1
=2-Amino-2-Deoxy-1-O-Phosphono-Alpha-D-Glucopyranose,
GP4
=2-Amino-2-Deoxy-4-O-Phosphono-Alpha-D-Glucopyranose,
KDO
=3-Deoxy-Alpha-D-Manno-Oct-2-Ulopyranosonic acid.
PDB code:
1q9w
(A).
2. Ligand:
HBC × 1
(2-Amino-3-Phenyl-Bicyclo[2.2.1]hept-2-Yl)-Phenyl- Methanone
PDB code:
1jgu
(L).
3. Ligand:
KDA-KDB × 1
KDA
=Prop-2-En-1-Yl 3-Deoxy-Alpha-D-Manno-Oct-2- Ulopyranosidonic acid,
KDB
=3,4,5-Trideoxy-Alpha-D-Erythro-Oct-3-En-2- Ulopyranosonic acid.
PDB code:
2r1w
(A).
4. Ligand:
KDA-KDD × 1
KDA
=Prop-2-En-1-Yl 3-Deoxy-Alpha-D-Manno-Oct-2- Ulopyranosidonic acid,
KDD
=2,6-Anhydro-3,5-Dideoxy-D-Ribo-Oct-2-Enonic acid.
PDB code:
2r1x
(A).
5. Ligand:
KDA-KDO × 1
KDA
=Prop-2-En-1-Yl 3-Deoxy-Alpha-D-Manno-Oct-2- Ulopyranosidonic acid,
KDO
=3-Deoxy-Alpha-D-Manno-Oct-2-Ulopyranosonic acid.
PDB code:
3t77
(A).
6. Ligand:
KDA-KDO-KDO × 1
KDA
=Prop-2-En-1-Yl 3-Deoxy-Alpha-D-Manno-Oct-2- Ulopyranosidonic acid,
KDO
=3-Deoxy-Alpha-D-Manno-Oct-2-Ulopyranosonic acid.
PDB code:
2r2b
(A).
7. Ligand:
KDA-KO1 × 1
KDA
=Prop-2-En-1-Yl 3-Deoxy-Alpha-D-Manno-Oct-2- Ulopyranosidonic acid,
KO1
=D-Glycero-Alpha-D-Talo-Oct-2-Ulopyranosonic acid.
PDB code:
2r23
(A).
8. Ligand:
KDR-KDO × 1
KDR
=Prop-2-En-1-Yl 3-Deoxy-Alpha-D-Manno-Octos-2- Ulopyranoside,
KDO
=3-Deoxy-Alpha-D-Manno-Oct-2-Ulopyranosonic acid.
PDB code:
2r1y
(A).
9. Ligand:
KO2 × 1
Prop-2-En-1-Yl d-Glycero-Alpha-D-Talo-Oct-2- Ulopyranosidonic acid
PDB code:
2r2h
(A).
10. Ligand:
LYS-HIS-VAL-PRO-GLY-GLY-GLY-SER-VAL × 1
PDB code:
5mp3
(L).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
ETX × 1
2-Ethoxyethanol
PDB code:
2fd6
(L).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
ETX × 1
2-Ethoxyethanol
PDB code:
2fd6
(L).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
2fd6
(L).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 1
PDB code:
2r1w
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 4
PDB codes:
2r1x
(A),
2r1y
(A),
2r2b
(A),
3t77
(A).