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Ligand clusters for UniProt code Q39TV8

Ligand clusters for Q39TV8: Benzoyl-CoA reductase, putative from Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)

6 ligand clusters
Cluster 1.
2 ligand types
3 ligands
Cluster 2.
4 ligand types
18 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
5 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 4z3xA  
JSmol
 

Structures

PDB   Schematic diagram
4z3xA    
4z3yA    
4z3wA    
4z40A    
4z3zA    

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: 4KX × 2
1,5 dienoyl-Coa
PDB codes: 4z3w(A), 4z3x(A).


 
2. Ligand: BYC × 1
Benzoyl coenzyme a
PDB code: 4z3y(A).

 

 Cluster 2 contains 4 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 5
PDB codes: 4z3w(A), 4z3x(A), 4z3y(A), 4z3z(A), 4z40(A).


 
2. Ligand: MTE × 6
Phosphonic acidmono-(2-Amino-5,6-Dimercapto-4-Oxo-3,7, 8a,9,10,10a-Hexahydro-4h-8-Oxa-1,3,9,10-
Tetraaza- Anthracen-7-Ylmethyl)ester
PDB codes: 4z3w(A), 4z3x(A), 4z3y(A),

__W
 
3. Metal: __W × 5
PDB codes: 4z3w(A), 4z3x(A), 4z3y(A), 4z3z(A), 4z40(A).


 
4. Ligand: MTE-MTE × 2
MTE=Phosphonic acidmono-(2-Amino-5,6-Dimercapto-4-Oxo-3,7, 8a,9,10,10a-Hexahydro-4h-8-Oxa-1,3,9,10-
Tetraaza- Anthracen-7-Ylmethyl)ester.
PDB codes: 4z3z(A), 4z40(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: PGE × 1
Triethylene glycol
PDB code: 4z3x(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: PGE × 1
Triethylene glycol
PDB code: 4z3x(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SF4 × 5
Iron/sulfur cluster
PDB codes: 4z3w(A), 4z3x(A), 4z3y(A), 4z3z(A), 4z40(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 2
PDB codes: 4z3z(A), 4z40(A).

 

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