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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q2TCH5
Ligand clusters for Q2TCH5: KillerRed from Anthomedusae sp. DC-2005
Top 6 (of 15) ligand clusters
Cluster 1.
1 ligand type
1 ligand
Cluster 2.
3 ligand types
5 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3gb3A
Structures
PDB
Schematic diagram
3gb3
A
4zbl
A
2wiq
A
2wis
A
4b30
A
Cluster 1 contains 1 ligand type
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Ligand
Description
1. Ligand:
CIT × 1
citric acid
Citric acid
PDB code:
4zbl
(A).
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4b30
(A).
2. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
3gb3
(A),
4b30
(A).
_Na
3. Metal:
_NA × 2
PDB codes:
4b30
(A),
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4b30
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
2wiq
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4b30
(A).
_Na
2. Metal:
_NA × 1
PDB code:
2wis
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4b30
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4b30
(A).