Ligand clusters for UniProt code Q2IU02

Ligand clusters for Q2IU02: Cytochrome P450 from Rhodopseudomonas palustris (strain HaA2)

		Top 6 (of 14) ligand clusters Cluster 1. 29 ligand types 65 ligands Cluster 2. 4 ligand types 4 ligands Cluster 3. 2 ligand types 2 ligands Cluster 4. 2 ligand types 14 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 4dnzA

Structures

PDB		Schematic diagram
4dnzA
4egnA
4egmA
4egoA
6u30A
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Cluster 1 contains 29 ligand types (of which only 20 are listed. Click for all)

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Ligand		Description
		1. Ligand: HEM × 32 Protoporphyrin IX containing fe PDB codes: 4dnz(A), 4do1(A), 4egm(A), 4egn(A), 4ego(A), 4egp(A), 5kdb(A), 5kdy(A), 5kdz(A), 5kt1(A), 5u6t(A), 5u6u(A), 5u6w(A), 5uvb(A), 5yqa(A), 5yqh(A), 6c2d(A), 6c3h(A), 6c3j(A), 6oow(A), 6oox(A), 6pq6(A), 6pqd(A), 6pqs(A), 6pqw(A), 6prr(A), 6prs(A), 6u3k(A), 6unn(A), 6vjx(A), 6wzp(A), 7kcs(A).
		2. Ligand: ANN × 3 4-Methoxybenzoic acid PDB codes: 4do1(A), 5kdy(A), 5kdz(A).
		3. Ligand: 4IA × 2 4-Propan-2-Ylbenzoic acid PDB codes: 5kdb(A), 6oox(A).
		4. Ligand: EGM × 2 4-Ethylbenzoic acid PDB codes: 4egm(A), 6oow(A).
		5. Ligand: MW7 × 2 4-Ethenylbenzoic acid PDB codes: 6wzp(A), 7kcs(A).
		6. Ligand: 1F1 × 1 1h-Indole-6-Carboxylic acid PDB code: 4ego(A).
		7. Ligand: 4MA × 1 4-Methylbenzoic acid PDB code: 6pqs(A).
		8. Ligand: 4MI × 1 4-Methylsulfanylbenzoic acid PDB code: 5kt1(A).
		9. Ligand: 81J × 1 4-Ethoxybenzoic acid PDB code: 5u6t(A).
		10. Ligand: 81M × 1 4-(Ethylsulfanyl)benzoic acid PDB code: 5u6u(A).
		11. Ligand: 81P × 1 4-(Methylamino)benzoic acid PDB code: 5u6w(A).
		12. Ligand: 8QM × 1 4-Cyclopropylbenzoic acid PDB code: 5uvb(A).
		13. Ligand: 8ZU × 1 4-Propylbenzoic acid PDB code: 5yqa(A).
		14. Ligand: 8ZX × 1 4-Methoxybenzamide PDB code: 5yqh(A).
		15. Ligand: EH1 × 1 4-Cyclohexylbenzoic acid PDB code: 6c2d(A).
		16. Ligand: EJD × 1 4-(Thiophen-3-Yl)benzoic acid PDB code: 6c3j(A).
		17. Ligand: EJV × 1 4-Heptylbenzoic acid PDB code: 6c3h(A).
		18. Ligand: FIV × 1 Naphthalene-2-Carboxylic acid PDB code: 4egp(A).
		19. Ligand: HEM-PQP × 1 HEM=Protoporphyrin IX containing fe, PQP=4-(1h-Imidazol-1-Yl)benzoic acid. PDB code: 6u31(A).
		20. Ligand: K3Z × 1 (E)-3-(4-Methoxyphenyl)acrylic acid PDB code: 6unn(A).
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Cluster 2 contains 4 ligand types

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Ligand		Description
		1. Ligand: 1F1 × 1 1h-Indole-6-Carboxylic acid PDB code: 4ego(A).
		2. Ligand: 8ZX × 1 4-Methoxybenzamide PDB code: 5yqh(A).
		3. Ligand: ACT × 1 Acetate ion PDB code: 6u30(A).
		4. Ligand: FIV × 1 Naphthalene-2-Carboxylic acid PDB code: 4egp(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: 1F1 × 1 1h-Indole-6-Carboxylic acid PDB code: 4ego(A).
		2. Ligand: 8ZX × 1 4-Methoxybenzamide PDB code: 5yqh(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 7 glycerin Glycerol PDB codes: 4dnz(A), 4do1(A), 4egm(A), 4egn(A), 4ego(A), 4egp(A), 5yqh(A).
		2. Ligand: SO4 × 7 Sulfate ion PDB codes: 4dnz(A), 4do1(A), 4egm(A), 4egn(A), 4ego(A), 4egp(A), 5yqh(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4ego(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 5kt1(A).