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Ligand clusters for UniProt code Q2F7J3

Ligand clusters for Q2F7J3: Gag-Pol polyprotein from Xenotropic MuLV-related virus (isolate VP35)

6 ligand clusters
Cluster 1.
2 ligand types
3 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 3v1oA  
JSmol
 

Structures

PDB   Schematic diagram
3v1oA    
3v1rA    

 

 Cluster 1 contains 2 ligand types

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Ligand Description

_Mn
 
1. Metal: _MN × 2
PDB codes: 3v1r(A),


 
2. Ligand: JTH × 1
2,7-Dihydroxy-4-(Propan-2-Yl)cyclohepta-2,4,6-Trien-1- One
PDB code: 3v1r(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: MRD × 2
(4r)-2-Methylpentane-2,4-Diol
PDB codes: 3v1o(A), 3v1r(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 3v1o(A), 3v1r(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 3v1o(A), 3v1r(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 3v1o(A), 3v1r(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 3v1o(A), 3v1r(A).

 

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