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Ligand clusters for UniProt code Q15910

Ligand clusters for Q15910: Histone-lysine N-methyltransferase EZH2 from Homo sapiens

Top 6 (of 9) ligand clusters
Cluster 1.
2 ligand types
3 ligands
Cluster 2.
3 ligand types
5 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
18 ligands
Representative protein: 6wkrC  
JSmol
 

Structures

PDB   Schematic diagram
6wkrC    
5hynA    
5ls6A    
5wg6A    
6c23K    
 more ...

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: ALA-ALA-ALA-ARG-LYS-PHE-ALA × 2
PDB codes: 6c23(K), 6c24(K).


 
2. Ligand: THR-LYS-ALA-ALA-ARG-MET-SER-ALA-PRO × 1
PDB code: 5hyn(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: SAH × 3
S-Adenosyl-L-Homocysteine
PDB codes: 5hyn(A), 6wkr(C), 7at8(A).


 
2. Ligand: 74D × 1
1-[(1~{r})-1-[1-[2,2-Bis(fluoranyl)propyl]piperidin-4- Yl]ethyl]-~{N}-[(4-Methoxy-6-Methyl-2-
Oxidanylidene- 3~{h}-Pyridin-3-Yl)methyl]-2-Methyl-Indole-3- Carboxamide
PDB code: 5ls6(A).


 
3. Ligand: A9G × 1
1-[(2s)-Butan-2-Yl]-N-[(4,6-Dimethyl-2-Oxo-1,2- Dihydropyridin-3-Yl)methyl]-3-Methyl-6-[6-
(Piperazin- 1-Yl)pyridin-3-Yl]-1h-Indole-4-Carboxamide
PDB code: 5wg6(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: LEU-GLN-ALA-GLN-ARG-M3L-PHE-ALA-GLN-SER × 1
M3L=N-Trimethyllysine.
PDB code: 5ls6(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 5h14(C).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 4mi5(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 18
PDB codes: 4mi0(A), 4mi5(A), 5hyn(A), 5ls6(A), 5wg6(A), 7at8(A),

 

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