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EBI
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Ligand clusters for UniProt code Q15858
Ligand clusters for Q15858: Sodium channel protein type 9 subunit alpha from Homo sapiens
Top 6 (of 22) ligand clusters
Cluster 1.
3 ligand types
9 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
2 ligand types
3 ligands
Cluster 6.
2 ligand types
2 ligands
Representative protein: 6nt3A
Structures
PDB
Schematic diagram
6nt3
A
6j8h
A
6j8g
A
6j8j
A
6j8i
A
more ...
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
POV × 6
(2s)-3-(Hexadecanoyloxy)-2-[(9z)-Octadec-9- Enoyloxy]propyl 2-(Trimethylammonio)ethyl phosphate
PDB codes:
6vxo
(A),
6w6o
(A),
2. Ligand:
L0A × 2
Digitonin
PDB codes:
6nt3
(A),
6nt4
(A).
3. Ligand:
PEE × 1
1,2-Dioleoyl-Sn-Glycero-3-Phosphoethanolamine
PDB code:
6nt4
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
PEE × 2
1,2-Dioleoyl-Sn-Glycero-3-Phosphoethanolamine
PDB codes:
6nt3
(A),
6nt4
(A).
2. Ligand:
POV × 2
(2s)-3-(Hexadecanoyloxy)-2-[(9z)-Octadec-9- Enoyloxy]propyl 2-(Trimethylammonio)ethyl phosphate
PDB codes:
6vxo
(A),
6w6o
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
LHG × 2
1,2-Dipalmitoyl-Phosphatidyl-Glycerole
PDB codes:
6nt3
(A),
6nt4
(A).
2. Ligand:
POV × 2
(2s)-3-(Hexadecanoyloxy)-2-[(9z)-Octadec-9- Enoyloxy]propyl 2-(Trimethylammonio)ethyl phosphate
PDB codes:
6vxo
(A),
6w6o
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
PEE × 2
1,2-Dioleoyl-Sn-Glycero-3-Phosphoethanolamine
PDB codes:
6nt3
(A),
6nt4
(A).
2. Ligand:
PX4 × 1
1,2-Dimyristoyl-Sn-Glycero-3-Phosphocholine
PDB code:
5ek0
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
PEE × 2
1,2-Dioleoyl-Sn-Glycero-3-Phosphoethanolamine
PDB codes:
6nt3
(A),
6nt4
(A).
2. Ligand:
PX4 × 1
1,2-Dimyristoyl-Sn-Glycero-3-Phosphocholine
PDB code:
5ek0
(A).
Cluster 6 contains 2 ligand types
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Ligand
Description
1. Ligand:
5P2 × 1
3-Cyano-4-[2-[2-(1-Ethylazetidin-3-Yl)pyrazol-3-Yl]-4- (Trifluoromethyl)phenoxy]-~{N}-(1,2,4-
Thiadiazol-5- Yl)benzenesulfonamide
PDB code:
5ek0
(A).
2. Ligand:
PX4 × 1
1,2-Dimyristoyl-Sn-Glycero-3-Phosphocholine
PDB code:
5ek0
(A).