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Ligand clusters for UniProt code Q15858

Ligand clusters for Q15858: Sodium channel protein type 9 subunit alpha from Homo sapiens

Top 6 (of 22) ligand clusters
Cluster 1.
3 ligand types
9 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
2 ligand types
3 ligands
Cluster 6.
2 ligand types
2 ligands
Representative protein: 6nt3A  
JSmol
 

Structures

PDB   Schematic diagram
6nt3A    
6j8hA    
6j8gA    
6j8jA    
6j8iA    
 more ...

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: POV × 6
(2s)-3-(Hexadecanoyloxy)-2-[(9z)-Octadec-9- Enoyloxy]propyl 2-(Trimethylammonio)ethyl phosphate
PDB codes: 6vxo(A), 6w6o(A),


 
2. Ligand: L0A × 2
Digitonin
PDB codes: 6nt3(A), 6nt4(A).


 
3. Ligand: PEE × 1
1,2-Dioleoyl-Sn-Glycero-3-Phosphoethanolamine
PDB code: 6nt4(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: PEE × 2
1,2-Dioleoyl-Sn-Glycero-3-Phosphoethanolamine
PDB codes: 6nt3(A), 6nt4(A).


 
2. Ligand: POV × 2
(2s)-3-(Hexadecanoyloxy)-2-[(9z)-Octadec-9- Enoyloxy]propyl 2-(Trimethylammonio)ethyl phosphate
PDB codes: 6vxo(A), 6w6o(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: LHG × 2
1,2-Dipalmitoyl-Phosphatidyl-Glycerole
PDB codes: 6nt3(A), 6nt4(A).


 
2. Ligand: POV × 2
(2s)-3-(Hexadecanoyloxy)-2-[(9z)-Octadec-9- Enoyloxy]propyl 2-(Trimethylammonio)ethyl phosphate
PDB codes: 6vxo(A), 6w6o(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: PEE × 2
1,2-Dioleoyl-Sn-Glycero-3-Phosphoethanolamine
PDB codes: 6nt3(A), 6nt4(A).


 
2. Ligand: PX4 × 1
1,2-Dimyristoyl-Sn-Glycero-3-Phosphocholine
PDB code: 5ek0(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: PEE × 2
1,2-Dioleoyl-Sn-Glycero-3-Phosphoethanolamine
PDB codes: 6nt3(A), 6nt4(A).


 
2. Ligand: PX4 × 1
1,2-Dimyristoyl-Sn-Glycero-3-Phosphocholine
PDB code: 5ek0(A).

 

 Cluster 6 contains 2 ligand types

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Ligand Description


 
1. Ligand: 5P2 × 1
3-Cyano-4-[2-[2-(1-Ethylazetidin-3-Yl)pyrazol-3-Yl]-4- (Trifluoromethyl)phenoxy]-~{N}-(1,2,4-
Thiadiazol-5- Yl)benzenesulfonamide
PDB code: 5ek0(A).


 
2. Ligand: PX4 × 1
1,2-Dimyristoyl-Sn-Glycero-3-Phosphocholine
PDB code: 5ek0(A).

 

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