Ligand clusters for UniProt code Q13822

Ligand clusters for Q13822: Ectonucleotide pyrophosphatase/phosphodiesterase family member 2 from Homo sapiens

		Top 6 (of 13) ligand clusters Cluster 1. 13 ligand types 28 ligands Cluster 2. 6 ligand types 8 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 4zg7A

Structures

PDB		Schematic diagram
4zg7A
5kxaA
4zg9A
5mhpA
5m7mA
		more ...

Cluster 1 contains 13 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
_Zn		1. Metal: _ZN × 13 PDB codes: 4zg6(A), 4zg7(A), 4zg9(A), 4zga(A), 5kxa(A), 5m7m(A), 5mhp(A),
		2. Ligand: GOL × 2 glycerin Glycerol PDB codes: 4zg6(A), 4zg7(A).
		3. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 4zg9(A), 4zga(A).
		4. Ligand: PO4 × 2 Phosphate ion PDB codes: 5kxa(A), 5mhp(A).
		5. Ligand: 4NY × 1 4-{(Z)-2-[6-Chloro-1-(4-Fluorobenzyl)-1h-Indol-3-Yl]-1- Cyanoethenyl}benzoic acid PDB code: 4zg6(A).
		6. Ligand: 4O0 × 1 3-({6-Chloro-7-Fluoro-2-Methyl-1-[2-Oxo-2- (Spiro[cyclopropane-1,3'-Indol]-1'(2'H)-Yl)ethyl]-1h- Indol-3-Yl}sulfanyl)-2-Fluorobenzoic acid PDB code: 4zg7(A).
		7. Ligand: 4O2 × 1 3-[(11as)-6-(4-Fluorobenzyl)-1,3-Dioxo-5,6,11,11a- Tetrahydro-1h-Imidazo[1',5':1,6]pyrido[3,4- B]indol- 2(3h)-Yl]propanoic acid PDB code: 4zg9(A).
		8. Ligand: 4O3 × 1 (11as)-6-(4-Fluorobenzyl)-5,6,11,11a-Tetrahydro-1h- Imidazo[1',5':1,6]pyrido[3,4-B]indole-1,3(2h)- Dione PDB code: 4zga(A).
		9. Ligand: 6Y7 × 1 3-[6-Chloranyl-2-Cyclopropyl-1-(1-Ethylpyrazol-4-Yl)-7- Fluoranyl-Indol-3-Yl]sulfanyl-2-Fluoranyl- Benzoic acid PDB code: 5kxa(A).
		10. Ligand: 7HR × 1 ~{N}-[6-[1-[3-(Dimethylamino)propylsulfonyl]piperidin- 4-Yl]-2-Ethyl-Imidazo[1,2-A]pyridin-3-Yl]-4- (4- Fluorophenyl)-~{N}-Methyl-1,3-Thiazol-2-Amine PDB code: 5m7m(A).
		11. Ligand: 7NB × 1 2-[[2-Ethyl-8-Methyl-6-[4-[2-(3-Oxidanylazetidin-1-Yl)- 2-Oxidanylidene-Ethyl]piperazin-1- Yl]imidazo[1,2- A]pyridin-3-Yl]-Methyl-Amino]-4-(4-Fluorophenyl)-1,3- Thiazole-5-Carbonitrile PDB code: 5mhp(A).
		12. Ligand: ACD × 1 Arachidonic acid PDB code: 4zga(A).
		13. Ligand: NKN × 1 (2r)-2-Hydroxy-3-(Phosphonooxy)propyl tetradecanoate PDB code: 4zg7(A).

Cluster 2 contains 6 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4zg7(A).
		2. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 5kxa(A).
		3. Ligand: NAG-NAG × 3 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 4zg7(A), 4zg9(A), 4zga(A).
		4. Ligand: NAG-NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 4zg6(A).
		5. Ligand: NAG-NAG-BMA-MAN-MAN-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 5m7m(A).
		6. Ligand: NAG-NAG-BMA-MAN-MAN-MAN-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 5mhp(A).

Cluster 3 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: 4O2 × 1 3-[(11as)-6-(4-Fluorobenzyl)-1,3-Dioxo-5,6,11,11a- Tetrahydro-1h-Imidazo[1',5':1,6]pyrido[3,4- B]indol- 2(3h)-Yl]propanoic acid PDB code: 4zg9(A).

Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 5mhp(A).

Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4zg7(A).

Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4zg7(A).