Ligand clusters for UniProt code Q13563

Ligand clusters for Q13563: Polycystin-2 from Homo sapiens

		Top 6 (of 10) ligand clusters Cluster 1. 5 ligand types 17 ligands Cluster 2. 4 ligand types 14 ligands Cluster 3. 2 ligand types 4 ligands Cluster 4. 2 ligand types 5 ligands Cluster 5. 2 ligand types 8 ligands Cluster 6. 1 ligand type 2 ligands
Representative protein: 5k47A

Structures

PDB		Schematic diagram
5k47A
5mkeA
5mkfA
6t9nA
6t9oA
		more ...

Cluster 1 contains 5 ligand types

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Ligand		Description
		1. Ligand: PLM × 3 palmitic acid Palmitic acid PDB codes: 5mke(A), 5mkf(A),
		2. Ligand: CLR × 2 cholesterol Cholesterol PDB codes: 6t9n(A), 6t9o(A).
		3. Ligand: UMQ × 9 Undecyl-Maltoside PDB codes: 6t9n(A), 6t9o(A),
		4. Ligand: PX6 × 2 1,2-Dipalmitoyl-Sn-Glycero-3-Phosphate PDB codes: 5mke(A), 5mkf(A).
		5. Ligand: CHS × 1 4-Amino-5-Cyclohexyl-3-Hydroxy-Pentanoic acid PDB code: 5mkf(A).

Cluster 2 contains 4 ligand types

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Ligand		Description
		1. Ligand: PLM × 3 palmitic acid Palmitic acid PDB codes: 5mke(A), 5mkf(A).
		2. Ligand: CLR × 2 cholesterol Cholesterol PDB codes: 6t9n(A), 6t9o(A).
		3. Ligand: UMQ × 7 Undecyl-Maltoside PDB codes: 6t9n(A), 6t9o(A),
		4. Ligand: PX6 × 2 1,2-Dipalmitoyl-Sn-Glycero-3-Phosphate PDB codes: 5mke(A), 5mkf(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: PLM × 2 palmitic acid Palmitic acid PDB codes: 5mke(A), 5mkf(A).
		2. Ligand: UMQ × 2 Undecyl-Maltoside PDB codes: 6t9n(A),

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: CHS × 4 4-Amino-5-Cyclohexyl-3-Hydroxy-Pentanoic acid PDB codes: 5mke(A), 5mkf(A),
		2. Ligand: UMQ × 1 Undecyl-Maltoside PDB code: 6t9n(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 3 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 5t4d(A), 6d1w(A), 6wb8(A).
		2. Ligand: NAG-NAG × 5 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 5k47(A), 5mke(A), 5mkf(A), 6t9n(A), 6t9o(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: UMQ × 2 Undecyl-Maltoside PDB codes: 6t9n(A), 6t9o(A).