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Ligand clusters for UniProt code Q13526

Ligand clusters for Q13526: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 from Homo sapiens

5 ligand clusters
Cluster 1.
7 ligand types
10 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
1 ligand
Representative protein: 5b3zA  
JSmol
 

Structures

PDB   Schematic diagram
5b3zA    
3kacA    
2lb3A    
2m9jA    
2m9fA    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 2m9f(A), 2m9j(A).

_Cl
 
2. Metal: _CL × 3
PDB codes: 5vtk(A),


 
3. Ligand: ARG-ILE-SEP-PRO-PRO-LEU-PRO-PHE × 1
SEP=Phosphoserine.
PDB code: 2n1o(A).


 
4. Ligand: FLC × 1
Citrate anion
PDB code: 4gwv(A).


 
5. Ligand: GLU-GLN-PRO-LEU-TPO-PRO-VAL-THR-ASP-LEU × 1
TPO=Phosphothreonine.
PDB code: 1i8g(B).


 
6. Ligand: ILE-PRO-GLU-TPO-PRO-PRO-PRO-GLY × 1
TPO=Phosphothreonine.
PDB code: 2lb3(A).


 
7. Ligand: SO4 × 1
Sulfate ion
PDB code: 5vtj(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GLC-GLC × 1
GLC=Alpha-D-Glucopyranose.
PDB code: 5b3z(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: 4BX × 1
3-(1h-Benzimidazol-2-Yl)propanoic acid
PDB code: 3kac(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: LMR × 1
(2s)-2-Hydroxybutanedioic acid
PDB code: 4gwt(A).

_Cl
 
2. Metal: _CL × 1
PDB code: 5vtk(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 5vtj(A).

 

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