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Ligand clusters for UniProt code Q09LY5

Ligand clusters for Q09LY5: Xylan alpha-(1->2)-glucuronosidase from Geobacillus stearothermophilus

Top 6 (of 21) ligand clusters
Cluster 1.
3 ligand types
4 ligands
Cluster 2.
1 ligand type
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
4 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1mqrA  
JSmol
 

Structures

PDB   Schematic diagram
1mqrA    
1k9fA    
1k9eA    
1mqpA    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 1k9e(A), 1mqp(A).


 
2. Ligand: GCV × 1
4-O-Methyl-Alpha-D-Glucopyranuronic acid
PDB code: 1k9e(A).


 
3. Ligand: XYP-XYP-GCV × 1
XYP=Beta-D-Xylopyranose, GCV=4-O-Methyl-Alpha-D-Glucopyranuronic acid.
PDB code: 1k9f(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 4
glycerin
Glycerol
PDB codes: 1k9e(A), 1k9f(A), 1mqp(A), 1mqr(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1k9e(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 4
glycerin
Glycerol
PDB codes: 1k9e(A), 1k9f(A), 1mqp(A), 1mqr(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1k9e(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1k9e(A).

 

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