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EBI
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PDBsum
Ligand clusters for UniProt code Q09LY5
Ligand clusters for Q09LY5: Xylan alpha-(1->2)-glucuronosidase from Geobacillus stearothermophilus
Top 6 (of 21) ligand clusters
Cluster 1.
3 ligand types
4 ligands
Cluster 2.
1 ligand type
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
4 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1mqrA
Structures
PDB
Schematic diagram
1mqr
A
1k9f
A
1k9e
A
1mqp
A
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
1k9e
(A),
1mqp
(A).
2. Ligand:
GCV × 1
4-O-Methyl-Alpha-D-Glucopyranuronic acid
PDB code:
1k9e
(A).
3. Ligand:
XYP-XYP-GCV × 1
XYP
=Beta-D-Xylopyranose,
GCV
=4-O-Methyl-Alpha-D-Glucopyranuronic acid.
PDB code:
1k9f
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
1k9e
(A),
1k9f
(A),
1mqp
(A),
1mqr
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1k9e
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
1k9e
(A),
1k9f
(A),
1mqp
(A),
1mqr
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1k9e
(A).
Cluster 6 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1k9e
(A).