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Ligand clusters for UniProt code Q04830
Ligand clusters for Q04830: Tail spike protein from Enterobacteria phage K1F
Top 6 (of 13) ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
3 ligand types
5 ligands
Cluster 3.
3 ligand types
3 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3gvjA
Structures
PDB
Schematic diagram
3gvj
A
3gvl
A
1v0f
A
3ju4
A
1v0e
A
more ...
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
SLB-SIA × 1
SLB
=N-Acetyl-Beta-Neuraminic acid,
SIA
=N-Acetyl-Alpha-Neuraminic acid.
PDB code:
3gvl
(A).
2. Ligand:
SLB-SIA-SIA × 1
SLB
=N-Acetyl-Beta-Neuraminic acid,
SIA
=N-Acetyl-Alpha-Neuraminic acid.
PDB code:
3gvk
(A).
3. Ligand:
SLB-SIA-SIA-SIA-SIA × 1
SLB
=N-Acetyl-Beta-Neuraminic acid,
SIA
=N-Acetyl-Alpha-Neuraminic acid.
PDB code:
3gvj
(A).
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
SLB × 3
N-Acetyl-Beta-Neuraminic acid
PDB codes:
1v0f
(A),
3gvl
(A),
3ju4
(A).
2. Ligand:
SLB-SIA × 1
SLB
=N-Acetyl-Beta-Neuraminic acid,
SIA
=N-Acetyl-Alpha-Neuraminic acid.
PDB code:
3gvk
(A).
3. Ligand:
SLB-SIA-SIA-SIA × 1
SLB
=N-Acetyl-Beta-Neuraminic acid,
SIA
=N-Acetyl-Alpha-Neuraminic acid.
PDB code:
3gvj
(A).
Cluster 3 contains 3 ligand types
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
3gw6
(A).
2. Ligand:
SLB × 1
N-Acetyl-Beta-Neuraminic acid
PDB code:
1v0f
(A).
3. Ligand:
SLB-SIA × 1
SLB
=N-Acetyl-Beta-Neuraminic acid,
SIA
=N-Acetyl-Alpha-Neuraminic acid.
PDB code:
3gvk
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
SLB-SIA-SIA × 1
SLB
=N-Acetyl-Beta-Neuraminic acid,
SIA
=N-Acetyl-Alpha-Neuraminic acid.
PDB code:
3gvk
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
SLB-SIA-SIA × 1
SLB
=N-Acetyl-Beta-Neuraminic acid,
SIA
=N-Acetyl-Alpha-Neuraminic acid.
PDB code:
3gvk
(A).
Cluster 6 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
1. Ligand:
SLB-SIA × 1
SLB
=N-Acetyl-Beta-Neuraminic acid,
SIA
=N-Acetyl-Alpha-Neuraminic acid.
PDB code:
3gvk
(A).