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Ligand clusters for UniProt code Q04830

Ligand clusters for Q04830: Tail spike protein from Enterobacteria phage K1F

Top 6 (of 13) ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
3 ligand types
5 ligands
Cluster 3.
3 ligand types
3 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3gvjA  
JSmol
 

Structures

PDB   Schematic diagram
3gvjA    
3gvlA    
1v0fA    
3ju4A    
1v0eA    
 more ...

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: SLB-SIA × 1
SLB=N-Acetyl-Beta-Neuraminic acid, SIA=N-Acetyl-Alpha-Neuraminic acid.
PDB code: 3gvl(A).


 
2. Ligand: SLB-SIA-SIA × 1
SLB=N-Acetyl-Beta-Neuraminic acid, SIA=N-Acetyl-Alpha-Neuraminic acid.
PDB code: 3gvk(A).


 
3. Ligand: SLB-SIA-SIA-SIA-SIA × 1
SLB=N-Acetyl-Beta-Neuraminic acid, SIA=N-Acetyl-Alpha-Neuraminic acid.
PDB code: 3gvj(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: SLB × 3
N-Acetyl-Beta-Neuraminic acid
PDB codes: 1v0f(A), 3gvl(A), 3ju4(A).


 
2. Ligand: SLB-SIA × 1
SLB=N-Acetyl-Beta-Neuraminic acid, SIA=N-Acetyl-Alpha-Neuraminic acid.
PDB code: 3gvk(A).


 
3. Ligand: SLB-SIA-SIA-SIA × 1
SLB=N-Acetyl-Beta-Neuraminic acid, SIA=N-Acetyl-Alpha-Neuraminic acid.
PDB code: 3gvj(A).

 

 Cluster 3 contains 3 ligand types

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Ligand Description


 
1. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 3gw6(A).


 
2. Ligand: SLB × 1
N-Acetyl-Beta-Neuraminic acid
PDB code: 1v0f(A).


 
3. Ligand: SLB-SIA × 1
SLB=N-Acetyl-Beta-Neuraminic acid, SIA=N-Acetyl-Alpha-Neuraminic acid.
PDB code: 3gvk(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SLB-SIA-SIA × 1
SLB=N-Acetyl-Beta-Neuraminic acid, SIA=N-Acetyl-Alpha-Neuraminic acid.
PDB code: 3gvk(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SLB-SIA-SIA × 1
SLB=N-Acetyl-Beta-Neuraminic acid, SIA=N-Acetyl-Alpha-Neuraminic acid.
PDB code: 3gvk(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SLB-SIA × 1
SLB=N-Acetyl-Beta-Neuraminic acid, SIA=N-Acetyl-Alpha-Neuraminic acid.
PDB code: 3gvk(A).

 

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