Ligand clusters for UniProt code Q03405

Ligand clusters for Q03405: Urokinase plasminogen activator surface receptor from Homo sapiens

		Top 6 (of 10) ligand clusters Cluster 1. 6 ligand types 9 ligands Cluster 2. 4 ligand types 6 ligands Cluster 3. 2 ligand types 2 ligands Cluster 4. 2 ligand types 5 ligands Cluster 5. 2 ligand types 2 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 3bt1U

Structures

PDB		Schematic diagram
3bt1U
4k24U
3u73U
1ywhA
3bt2U
		more ...

Cluster 1 contains 6 ligand types

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Ligand		Description
		1. Ligand: NAG × 2 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 3bt1(U), 3bt2(U).
		2. Ligand: NAG-NAG × 3 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 2i9b(G), 3u74(U), 4k24(U).
		3. Ligand: NAG-FUC × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose. PDB code: 2fd6(U).
		4. Ligand: NAG-NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 2i9b(E).
		5. Ligand: NAG-NAG-FUC × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose. PDB code: 1ywh(A).
		6. Ligand: NAG-NAG-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 3u73(U).

Cluster 2 contains 4 ligand types

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Ligand		Description
		1. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 3u74(U).
		2. Ligand: NAG-NAG × 3 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 3bt2(U), 3u73(U), 4k24(U).
		3. Ligand: NAG-NAG-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 3bt1(U).
		4. Ligand: NDG × 1 2-Acetamido-2-Deoxy-Alpha-D-Glucopyranose PDB code: 2fd6(U).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 1ywh(A).
		2. Ligand: NAG-NAG × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB code: 3u73(U).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 3 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 1ywh(A), 3bt1(U), 4k24(U).
		2. Ligand: NAG-NAG × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 2fd6(U), 3bt2(U).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: PG4 × 1 Tetraethylene glycol PDB code: 2fd6(U).
		2. Ligand: PGE × 1 Triethylene glycol PDB code: 2fd6(U).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: ETX × 1 2-Ethoxyethanol PDB code: 2fd6(U).