Ligand clusters for UniProt code Q02RL6

Ligand clusters for Q02RL6: tRNA (guanine-N(1)-)-methyltransferase from Pseudomonas aeruginosa (strain UCBPP-PA14)

		3 ligand clusters Cluster 1. 5 ligand types 6 ligands Cluster 2. 4 ligand types 6 ligands Cluster 3. 1 ligand type 1 ligand
Representative protein: 5wyrA

Structures

PDB		Schematic diagram
5wyrA
5zhnA
5zhmA
6afkA
5wyqA
		more ...

Cluster 1 contains 5 ligand types

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Ligand		Description
		1. Ligand: SAM × 2 ademetionine S-Adenosylmethionine PDB codes: 5wyq(A), 6afk(A).
		2. Ligand: 9D0 × 1 N-({4-[(Octylamino)methyl]phenyl}methyl)-4-Oxo-3,4- Dihydrothieno[2,3-D]pyrimidine-5-Carboxamide PDB code: 5zhn(A).
		3. Ligand: 9D3 × 1 N-({4-[(Diethylamino)methyl]phenyl}methyl)-4-Oxo-3,4- Dihydrothieno[2,3-D]pyrimidine-5-Carboxamide PDB code: 5zhm(A).
		4. Ligand: BWR × 1 ~{N}-[[4-[(4-Azanylpiperidin-1-Yl) methyl]phenyl]methyl]-4-Oxidanylidene-3~{h}-Thieno[2, 3- D]pyrimidine-5-Carboxamide PDB code: 6joe(A).
		5. Ligand: SFG × 1 Sinefungin PDB code: 5wyr(A).

Cluster 2 contains 4 ligand types

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Ligand		Description
		1. Ligand: SAM × 3 ademetionine S-Adenosylmethionine PDB codes: 5wyq(A), 5zhm(A), 6joe(A).
		2. Ligand: 9D0 × 1 N-({4-[(Octylamino)methyl]phenyl}methyl)-4-Oxo-3,4- Dihydrothieno[2,3-D]pyrimidine-5-Carboxamide PDB code: 5zhn(A).
		3. Ligand: 9WO × 1 N-{(3s)-1-[3-(Pyridin-4-Yl)-1h-Pyrazol-5-Yl]piperidin- 3-Yl}-1h-Indole-2-Carboxamide PDB code: 6afk(A).
		4. Ligand: SFG × 1 Sinefungin PDB code: 5wyr(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: PO4 × 1 Phosphate ion PDB code: 6joe(A).