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Ligand clusters for UniProt code P9WNS1

Ligand clusters for P9WNS1: 1-deoxy-D-xylulose 5-phosphate reductoisomerase from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)

3 ligand clusters
Cluster 1.
13 ligand types
39 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
7 ligands
Representative protein: 2c82A  
JSmol
 

Structures

PDB   Schematic diagram
2c82A    
2jd2A    
4rcvA    
2jcyA    
2jd1A    
 more ...

 

 Cluster 1 contains 13 ligand types

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Ligand Description


 
1. Ligand: NDP × 4
Nadph dihydro-Nicotinamide-Adenine- Dinucleotide phosphate
PDB codes: 2jcv(A), 2jcx(A), 2jd0(A), 2jd1(A).

_Mn
 
2. Metal: _MN × 10
PDB codes: 2jd1(A), 2jd2(A), 3ras(A), 3zhx(A), 3zhy(A), 4a03(A), 4aic(A), 4ooe(A), 4oof(A), 4rcv(A).


 
3. Ligand: FOM × 2
3-[Formyl(hydroxy)amino]propylphosphonic acid
PDB codes: 2jcv(A), 2jcx(A).


 
4. Ligand: NDP × 7
Nadph dihydro-Nicotinamide-Adenine-Dinucleotide phosphate
PDB codes: 3ras(A), 3zhy(A), 4a03(A), 4aic(A), 4ooe(A), 4oof(A), 4rcv(A).


 
5. Ligand: FOM × 3
3-[Formyl(hydroxy)amino]propylphosphonic acid
PDB codes: 4aic(A), 4ooe(A), 4oof(A).


 
6. Ligand: SO4 × 5
Sulfate ion
PDB codes: 2c82(A), 2jcy(A), 2jd0(A), 2jd1(A), 2jd2(A).


 
7. Ligand: FM6 × 2
[(1s)-1-(3,4-Dichlorophenyl)-3- [Oxidanyl(phenylcarbonyl)amino]propyl]phosphonic acid
PDB codes: 3zhx(A), 3zhy(A).


 
8. Ligand: DE2 × 1
1-Deoxy-L-Erythrulose
PDB code: 4rcv(A).


 
9. Ligand: F98 × 1
3-[Ethanoyl(hydroxy)amino]propylphosphonic acid
PDB code: 4a03(A).


 
10. Ligand: FM5-DCV × 1
FM5=3-(N-Hydroxyacetamido)-1-(3,4-Dichlorophenyl) propylphosphonic acid, DCV=[(1r)-3-[Acetyl(hydroxy)amino]-1-(3,4-Dichlorophenyl) propyl]phosphonic acid.
PDB code: 3ras(A).


 
11. Ligand: FM7 × 1
[(1s)-1-(3,4-Dichlorophenyl)-3-[Oxidanyl-[2-[[3- (Trifluoromethyl)phenyl]amino]phenyl]carbonyl-
Amino]propyl]phosphonic acid
PDB code: 3zhz(A).


 
12. Ligand: FM8 × 1
[(1s)-1-(3,4-Dichlorophenyl)-3-{Hydroxy[2- (1h-1,2,4-Triazol-1-
Ylmethyl)benzoyl]amino} propyl]phosphonic acid
PDB code: 3zi0(A).


 
13. Ligand: PO3 × 1
Phosphite ion
PDB code: 4rcv(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4a03(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 7
Sulfate ion
PDB codes: 2jcv(A), 2jcx(A), 2jcy(A), 2jd0(A), 2jd1(A), 2jd2(A), 4aic(A).

 

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