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EBI
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Ligand clusters for UniProt code P9WNS1
Ligand clusters for P9WNS1: 1-deoxy-D-xylulose 5-phosphate reductoisomerase from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
3 ligand clusters
Cluster 1.
13 ligand types
39 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
7 ligands
Representative protein: 2c82A
Structures
PDB
Schematic diagram
2c82
A
2jd2
A
4rcv
A
2jcy
A
2jd1
A
more ...
Cluster 1 contains 13 ligand types
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Ligand
Description
1. Ligand:
NDP × 4
Nadph dihydro-Nicotinamide-Adenine- Dinucleotide phosphate
PDB codes:
2jcv
(A),
2jcx
(A),
2jd0
(A),
2jd1
(A).
_Mn
2. Metal:
_MN × 10
PDB codes:
2jd1
(A),
2jd2
(A),
3ras
(A),
3zhx
(A),
3zhy
(A),
4a03
(A),
4aic
(A),
4ooe
(A),
4oof
(A),
4rcv
(A).
3. Ligand:
FOM × 2
3-[Formyl(hydroxy)amino]propylphosphonic acid
PDB codes:
2jcv
(A),
2jcx
(A).
4. Ligand:
NDP × 7
Nadph dihydro-Nicotinamide-Adenine-Dinucleotide phosphate
PDB codes:
3ras
(A),
3zhy
(A),
4a03
(A),
4aic
(A),
4ooe
(A),
4oof
(A),
4rcv
(A).
5. Ligand:
FOM × 3
3-[Formyl(hydroxy)amino]propylphosphonic acid
PDB codes:
4aic
(A),
4ooe
(A),
4oof
(A).
6. Ligand:
SO4 × 5
Sulfate ion
PDB codes:
2c82
(A),
2jcy
(A),
2jd0
(A),
2jd1
(A),
2jd2
(A).
7. Ligand:
FM6 × 2
[(1s)-1-(3,4-Dichlorophenyl)-3- [Oxidanyl(phenylcarbonyl)amino]propyl]phosphonic acid
PDB codes:
3zhx
(A),
3zhy
(A).
8. Ligand:
DE2 × 1
1-Deoxy-L-Erythrulose
PDB code:
4rcv
(A).
9. Ligand:
F98 × 1
3-[Ethanoyl(hydroxy)amino]propylphosphonic acid
PDB code:
4a03
(A).
10. Ligand:
FM5-DCV × 1
FM5
=3-(N-Hydroxyacetamido)-1-(3,4-Dichlorophenyl) propylphosphonic acid,
DCV
=[(1r)-3-[Acetyl(hydroxy)amino]-1-(3,4-Dichlorophenyl) propyl]phosphonic acid.
PDB code:
3ras
(A).
11. Ligand:
FM7 × 1
[(1s)-1-(3,4-Dichlorophenyl)-3-[Oxidanyl-[2-[[3- (Trifluoromethyl)phenyl]amino]phenyl]carbonyl-
Amino]propyl]phosphonic acid
PDB code:
3zhz
(A).
12. Ligand:
FM8 × 1
[(1s)-1-(3,4-Dichlorophenyl)-3-{Hydroxy[2- (1h-1,2,4-Triazol-1-
Ylmethyl)benzoyl]amino} propyl]phosphonic acid
PDB code:
3zi0
(A).
13. Ligand:
PO3 × 1
Phosphite ion
PDB code:
4rcv
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4a03
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 7
Sulfate ion
PDB codes:
2jcv
(A),
2jcx
(A),
2jcy
(A),
2jd0
(A),
2jd1
(A),
2jd2
(A),
4aic
(A).