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Ligand clusters for UniProt code P9WI55
Ligand clusters for P9WI55: Inorganic pyrophosphatase from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
5 ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
8 ligand types
20 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
4 ligand types
6 ligands
Representative protein: 1wcfA
Structures
PDB
Schematic diagram
1wcf
A
5kde
A
4z72
A
2uxs
A
4z73
A
more ...
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1sxv
(A).
2. Ligand:
6RT × 1
2,4-Bis(aziridin-1-Yl)-6-(1-Phenylpyrrol-2-Yl)-1,3,5- Triazine
PDB code:
5kde
(A).
3. Ligand:
6RU × 1
~{N}2,~{N}2,~{N}4,~{N}4-Tetramethyl-6-(1-Phenylpyrrol- 2-Yl)-1,3,5-Triazine-2,4-Diamine
PDB code:
5kdf
(A).
Cluster 2 contains 8 ligand types
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Ligand
Description
1. Ligand:
PO4 × 1
Phosphate ion
PDB code:
1wcf
(A).
_Mn
2. Metal:
_MN × 2
PDB codes:
4z73
(A),
_Mg
3. Metal:
_MG × 1
PDB code:
4z71
(A).
__K
4. Metal:
__K × 1
PDB code:
1wcf
(A).
5. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1sxv
(A).
_Ca
6. Metal:
_CA × 7
PDB codes:
4z70
(A),
4z72
(A),
4z74
(A),
5kdf
(A).
7. Ligand:
PO4 × 4
Phosphate ion
PDB codes:
2uxs
(A),
4z72
(A),
4z73
(A).
8. Ligand:
POP × 3
Pyrophosphate 2-
PDB codes:
4z74
(A),
5kde
(A),
5kdf
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1sxv
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1sxv
(A).
Cluster 5 contains 4 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
4z71
(A).
_Mn
2. Metal:
_MN × 1
PDB code:
4z73
(A).
__K
3. Metal:
__K × 1
PDB code:
1wcf
(A).
_Ca
4. Metal:
_CA × 3
PDB codes:
4z72
(A),
4z74
(A),
5kdf
(A).