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Ligand clusters for UniProt code P9WI55

Ligand clusters for P9WI55: Inorganic pyrophosphatase from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)

5 ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
8 ligand types
20 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
4 ligand types
6 ligands
Representative protein: 1wcfA  
JSmol
 

Structures

PDB   Schematic diagram
1wcfA    
5kdeA    
4z72A    
2uxsA    
4z73A    
 more ...

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1sxv(A).


 
2. Ligand: 6RT × 1
2,4-Bis(aziridin-1-Yl)-6-(1-Phenylpyrrol-2-Yl)-1,3,5- Triazine
PDB code: 5kde(A).


 
3. Ligand: 6RU × 1
~{N}2,~{N}2,~{N}4,~{N}4-Tetramethyl-6-(1-Phenylpyrrol- 2-Yl)-1,3,5-Triazine-2,4-Diamine
PDB code: 5kdf(A).

 

 Cluster 2 contains 8 ligand types

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 1wcf(A).

_Mn
 
2. Metal: _MN × 2
PDB codes: 4z73(A),

_Mg
 
3. Metal: _MG × 1
PDB code: 4z71(A).

__K
 
4. Metal: __K × 1
PDB code: 1wcf(A).


 
5. Ligand: SO4 × 1
Sulfate ion
PDB code: 1sxv(A).

_Ca
 
6. Metal: _CA × 7
PDB codes: 4z70(A), 4z72(A), 4z74(A), 5kdf(A).


 
7. Ligand: PO4 × 4
Phosphate ion
PDB codes: 2uxs(A), 4z72(A), 4z73(A).


 
8. Ligand: POP × 3
Pyrophosphate 2-
PDB codes: 4z74(A), 5kde(A), 5kdf(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1sxv(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1sxv(A).

 

 Cluster 5 contains 4 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 1
PDB code: 4z71(A).

_Mn
 
2. Metal: _MN × 1
PDB code: 4z73(A).

__K
 
3. Metal: __K × 1
PDB code: 1wcf(A).

_Ca
 
4. Metal: _CA × 3
PDB codes: 4z72(A), 4z74(A), 5kdf(A).

 

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