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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P94494
Ligand clusters for P94494: Alanine racemase 2 from Bacillus subtilis (strain 168)
Top 6 (of 13) ligand clusters
Cluster 1.
2 ligand types
4 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5irpA
Structures
PDB
Schematic diagram
5irp
A
6q70
A
6q71
A
6q72
A
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
PLP × 3
pyridoxal phosphate
Pyridoxal-5'-Phosphate
PDB codes:
6q70
(A),
6q71
(A),
6q72
(A).
2. Ligand:
UAH × 1
(5-Hydroxy-6-Methylpyridin-3-Yl)methyl dihydrogen phosphate
PDB code:
5irp
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code:
5irp
(A).
_Cl
2. Metal:
_CL × 1
PDB code:
5irp
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code:
5irp
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
5irp
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
5irp
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5irp
(A).