Ligand clusters for UniProt code P82543

Ligand clusters for P82543: Cytochrome c oxidase polypeptide 2A from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)

		4 ligand clusters Cluster 1. 5 ligand types 25 ligands Cluster 2. 3 ligand types 47 ligands Cluster 3. 1 ligand type 16 ligands Cluster 4. 1 ligand type 14 ligands
Representative protein: 1ehkC

Structures

PDB		Schematic diagram
1ehkC
4n4yC
3qjuC
3eh4C
4faaC
		more ...

Cluster 1 contains 5 ligand types

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Ligand		Description
		1. Ligand: HAS × 13 Heme-As PDB codes: 1ehk(C), 1xme(C), 2qpd(C), 3bvd(C), 3eh3(C), 3eh4(C), 3qju(C), 3s38(C), 3s39(C), 3s3a(C), 3s3b(C), 3s3c(C), 3s3d(C).
		2. Ligand: HAS-PER × 6 HAS=Heme-As, PER=Peroxide ion. PDB codes: 3s8f(C), 4g71(C), 4g72(C), 4g7s(C), 4gp5(C), 4gp8(C).
		3. Ligand: HAS-CMO × 3 HAS=Heme-As, CMO=Carbon monoxide. PDB codes: 3qjq(C), 3qjr(C), 3qjv(C).
		4. Ligand: HAS-_CU × 2 PDB codes: 3s8g(C), 4g70(C).
		5. Ligand: HAS-PEO × 1 HAS=Heme-As, PEO=Hydrogen peroxide. PDB code: 4faa(C).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: BNG × 1 Nonyl beta-D-Glucopyranoside PDB code: 1ehk(C).
		2. Ligand: OLC × 44 (2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate PDB codes: 3s8f(C), 3s8g(C), 4fa7(C), 4faa(C), 4g70(C), 4g71(C), 4g72(C), 4g7q(C), 4g7r(C), 4g7s(C), 4gp4(C), 4gp5(C), 4gp8(C), 4n4y(C), 5ndc(C),
		3. Ligand: BNG × 2 Nonyl beta-D-Glucopyranoside PDB codes: 3eh4(C), 3eh5(C).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: OLC × 16 (2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate PDB codes: 3s8f(C), 3s8g(C), 4fa7(C), 4faa(C), 4g70(C), 4g71(C), 4g72(C), 4g7q(C), 4g7r(C), 4g7s(C), 4gp4(C), 4gp5(C), 4gp8(C), 4n4y(C), 5ndc(C).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: OLC × 14 (2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate PDB codes: 3s8f(C), 3s8g(C), 4fa7(C), 4faa(C), 4g70(C), 4g71(C), 4g72(C), 4g7q(C), 4g7r(C), 4g7s(C), 4gp4(C), 4gp8(C), 4n4y(C), 5ndc(C).