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Ligand clusters for UniProt code P80561

Ligand clusters for P80561: Aminopeptidase S from Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)

3 ligand clusters
Cluster 1.
11 ligand types
32 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
11 ligands
Representative protein: 1f2oA  
JSmol
 

Structures

PDB   Schematic diagram
1f2oA    
1cp7A    
1xbuA    
1tf9A    
1tkjA    
 more ...

 

 Cluster 1 contains 11 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 22
PDB codes: 1cp7(A), 1f2o(A), 1f2p(A), 1qq9(A), 1tf8(A), 1tf9(A), 1tkf(A), 1tkh(A), 1tkj(A), 1xbu(A), 1xjo(A),


 
2. Ligand: MED × 1
d-methionine
D-Methionine
PDB code: 1tkj(A).


 
3. Ligand: MET × 1
methionine
PDB code: 1qq9(A).


 
4. Ligand: PHE × 1
phenylalanine
PDB code: 1f2p(A).


 
5. Ligand: DPN × 1
D-Phenylalanine
PDB code: 1tkh(A).


 
6. Ligand: DTR × 1
D-Tryptophan
PDB code: 1tkf(A).


 
7. Ligand: IOY × 1
P-Iodo-D-Phenylalanine
PDB code: 1xbu(A).


 
8. Ligand: LEU × 1
PDB code: 1f2o(A).


 
9. Ligand: PHI × 1
Iodo-Phenylalanine
PDB code: 1tf9(A).


 
10. Ligand: PO4 × 1
Phosphate ion
PDB code: 1xjo(A).


 
11. Ligand: TRP × 1
PDB code: 1tf8(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: DPN × 1
D-Phenylalanine
PDB code: 1tkh(A).


 
2. Ligand: TRP × 1
PDB code: 1tf8(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Ca
 
1. Metal: _CA × 11
PDB codes: 1cp7(A), 1f2o(A), 1f2p(A), 1qq9(A), 1tf8(A), 1tf9(A), 1tkf(A), 1tkh(A), 1tkj(A), 1xbu(A), 1xjo(A).

 

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