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Ligand clusters for UniProt code P63043

Ligand clusters for P63043: Stathmin-4 from Rattus norvegicus

5 ligand clusters
Cluster 1.
3 ligand types
7 ligands
Cluster 2.
3 ligand types
18 ligands
Cluster 3.
1 ligand type
8 ligands
Cluster 4.
1 ligand type
6 ligands
Cluster 5.
1 ligand type
6 ligands
Representative protein: 3rycE  
JSmol
 

Structures

PDB   Schematic diagram
3rycE    
3ryfE    
5jh7E    
5bmvE    
5z4pE    
 more ...

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 5z4p(E).


 
2. Ligand: IMD × 5
Imidazole
PDB codes: 4o2b(E), 5gon(E), 5xaf(E), 5xag(E), 5z4p(E).


 
3. Ligand: MES × 1
2-(N-Morpholino)-Ethanesulfonic acid
PDB code: 4i50(E).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 13
glycerin
Glycerol
PDB codes: 4o2b(E), 4o4j(E), 4tv8(E), 4zhq(E), 4zol(E), 5bmv(E), 5gon(E), 5ov7(E), 5xaf(E), 5xag(E), 5z4p(E), 6s9e(E), 6ses(E).


 
2. Ligand: DMS × 1
dimethyl sulfoxide
Dimethyl sulfoxide
PDB code: 6fjf(E).

_Ca
 
3. Metal: _CA × 4
PDB codes: 4o2a(E), 5jh7(E), 5lyj(E), 6knz(E).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 8
glycerin
Glycerol
PDB codes: 4i4t(E), 4tv9(E), 4zi7(E), 5jh7(E), 5jvd(E), 6tis(E), 6tiy(E), 6tiz(E).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 6
glycerin
Glycerol
PDB codes: 4o2b(E), 5gon(E), 5osk(E), 5xaf(E), 5xag(E), 5z4p(E).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 6
Sulfate ion
PDB codes: 3ryc(E), 3ryf(E), 3ryi(E), 6h9b(E), 6tiy(E), 6tiz(E).

 

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