Ligand clusters for UniProt code P61626

Ligand clusters for P61626: Lysozyme C from Homo sapiens

		Top 6 (of 17) ligand clusters Cluster 1. 12 ligand types 29 ligands Cluster 2. 3 ligand types 4 ligands Cluster 3. 2 ligand types 3 ligands Cluster 4. 3 ligand types 13 ligands Cluster 5. 2 ligand types 7 ligands Cluster 6. 2 ligand types 8 ligands
Representative protein: 1lz6A

Structures

PDB		Schematic diagram
1lz6A
1lmtA
3ebaB
4i0cA
1remA
		more ...

Cluster 1 contains 12 ligand types

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Ligand		Description
		1. Ligand: GOL × 9 glycerin Glycerol PDB codes: 1d6p(A), 1d6q(A), 1re2(A), 1rey(A), 1rez(A), 1ubz(A), 4i0c(A).
		2. Ligand: CYS × 1 cysteine PDB code: 208l(A).
		3. Ligand: GSH × 1 glutathione Glutathione PDB code: 1hnl(A).
		4. Ligand: SC2 × 1 acetylcysteine N-Acetyl-L-Cysteine PDB code: 207l(A).
		5. Ligand: NAG-GAL × 6 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose. PDB codes: 1d6q(A), 1re2(A), 1rez(A), 1ubz(A),
		6. Ligand: NAG-NAG × 3 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 1d6p(A), 1lzs(A), 1rey(A).
		7. Ligand: NAG-NAG-NAG × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 1bb5(A), 1lmt(A).
		8. Ligand: NAG-NAG-NAG-NAG × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 1lzr(A), 1lzs(A).
		9. Ligand: NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 1rem(A).
		10. Ligand: NO3 × 1 Nitrate ion PDB code: 1jsf(A).
		11. Ligand: PGR × 1 R-1,2-Propanediol PDB code: 1rem(A).
		12. Ligand: TVG-GLA-GZL-GLA × 1 TVG=Propyl beta-D-Galactofuranoside, GLA=Alpha-D-Galactopyranose, GZL=Beta-D-Galactofuranose. PDB code: 5lsh(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
_Na		1. Metal: _NA × 2 PDB codes: 1c7p(A), 1ioc(A).
		2. Ligand: NO3 × 1 Nitrate ion PDB code: 1jsf(A).
		3. Ligand: SO4 × 1 Sulfate ion PDB code: 3eba(B).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: SO4 × 2 Sulfate ion PDB codes: 1ip3(A), 5lvk(A).
		2. Ligand: NO3 × 1 Nitrate ion PDB code: 1jsf(A).

Cluster 4 contains 3 ligand types

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Ligand		Description
_Cl		1. Metal: _CL × 7 PDB codes: 1iwt(A), 1iwu(A), 1iwv(A), 1iww(A), 1iwx(A), 1iwy(A), 1iwz(A).
		2. Ligand: NO3 × 5 Nitrate ion PDB codes: 1jka(A), 1jkb(A), 1jkc(A), 1jkd(A), 1jsf(A).
_Na		3. Metal: _NA × 1 PDB code: 1gbz(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
_Cl		1. Metal: _CL × 5 PDB codes: 1lz6(A), 1wqm(A), 1wqn(A), 1wqp(A), 1wqr(A).
		2. Ligand: SO4 × 2 Sulfate ion PDB codes: 1ip3(A), 5lvk(A).

Cluster 6 contains 2 ligand types

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Ligand		Description
		1. Ligand: NO3 × 6 Nitrate ion PDB codes: 1jka(A), 1jkb(A), 1jkc(A), 1jkd(A), 1jsf(A), 1rem(A).
_Na		2. Metal: _NA × 2 PDB codes: 1c7p(A), 1ioc(A).