Ligand clusters for UniProt code P57083

Ligand clusters for P57083: Envelope glycoprotein D from Human herpesvirus 1 (strain Patton)

		Top 6 (of 9) ligand clusters Cluster 1. 3 ligand types 5 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 2 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 2c36A

Structures

PDB		Schematic diagram
2c36A
2c3aB
2c3aA
1jmaA
1l2gA

Cluster 1 contains 3 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 1l2g(A).
		2. Ligand: NAG-NAG × 3 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 1jma(A), 2c3a(A),
		3. Ligand: NAG-NAG-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 2c36(A).

Cluster 2 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 1jma(A).

Cluster 3 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 1jma(A).

Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 1jma(A).

Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
_Zn		1. Metal: _ZN × 2 PDB codes: 2c36(A), 2c3a(B).

Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
_Zn		1. Metal: _ZN × 1 PDB code: 2c3a(A).