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Ligand clusters for UniProt code P55915
Ligand clusters for P55915: Concanavalin-Br from Canavalia brasiliensis
Top 6 (of 13) ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
7 ligand types
10 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
3 ligand types
6 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1azdA
Structures
PDB
Schematic diagram
1azd
A
4p14
A
4h55
A
2cyf
A
6vb8
A
more ...
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
ACE-MET-TYR-TRP-TYR-PRO-TYR-NH2 × 1
ACE
=Acetyl group,
NH2
=Amino group.
PDB code:
1joj
(A).
2. Ligand:
MET-TYR-TRP-TYR-PRO-TYR-ALA-SER-GLY-SER × 1
PDB code:
1jui
(A).
Cluster 2 contains 7 ligand types
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Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
3ju9
(A),
4p14
(A),
6vb8
(A).
2. Ligand:
ADE × 1
adenine
Adenine
PDB code:
4p14
(A).
3. Ligand:
IPA × 1
isopropyl alcohol
Isopropyl alcohol
PDB code:
4pcr
(A).
4. Ligand:
MMA-MAN × 2
MMA
=Methyl alpha-D-Mannopyranoside,
MAN
=Alpha-D-Mannopyranose.
PDB codes:
1qdc
(A),
1qdo
(A).
5. Ligand:
BDR × 1
Beta-D-Ribofuranose
PDB code:
4h55
(A).
6. Ligand:
GLC-GLC × 1
GLC
=Alpha-D-Glucopyranose.
PDB code:
2cyf
(A).
_Cl
7. Metal:
_CL × 1
PDB code:
3ju9
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
IAC × 1
1h-Indol-3-Ylacetic acid
PDB code:
6vb8
(A).
2. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
4pcr
(A).
Cluster 4 contains 3 ligand types
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Ligand
Description
1. Ligand:
ABU × 1
gamma-aminobutyric acid
Gamma-Amino-Butanoic acid
PDB code:
4pcr
(A).
2. Ligand:
ACY × 1
acetic acid
Acetic acid
PDB code:
1dq2
(A).
3. Ligand:
DBB × 4
D-Alpha-Aminobutyric acid
PDB codes:
3ju9
(A),
4h55
(A),
4p14
(A),
6vb8
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
ABU × 1
gamma-aminobutyric acid
Gamma-Amino-Butanoic acid
PDB code:
4pcr
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
ABU × 1
gamma-aminobutyric acid
Gamma-Amino-Butanoic acid
PDB code:
4pcr
(A).