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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P53554
Ligand clusters for P53554: Biotin biosynthesis cytochrome P450 from Bacillus subtilis (strain 168)
2 ligand clusters
Cluster 1.
4 ligand types
6 ligands
Cluster 2.
1 ligand type
3 ligands
Representative protein: 3ejdB
Structures
PDB
Schematic diagram
3ejd
B
3ejb
B
3eje
B
Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
HEM × 3
Protoporphyrin IX containing fe
PDB codes:
3ejb
(B),
3ejd
(B),
3eje
(B).
2. Ligand:
ZMO × 1
S-[2-({N-[(2s)-2-Hydroxy-3,3-Dimethyl-4-(Phosphonooxy) butanoyl]-Beta-Alanyl}amino)ethyl] (9z)-
Octadec-9- Enethioate
PDB code:
3eje
(B).
3. Ligand:
ZMP × 1
S-[2-({N-[(2s)-2-Hydroxy-3,3-Dimethyl-4-(Phosphonooxy) butanoyl]-Beta-
Alanyl}amino)ethyl] tetradecanethioate
PDB code:
3ejb
(B).
4. Ligand:
ZMQ × 1
S-[2-({N-[(2s)-2-Hydroxy-3,3-Dimethyl-4-(Phosphonooxy) butanoyl]-Beta-Alanyl}amino)ethyl] (9z)-
Hexadec-9- Enethioate
PDB code:
3ejd
(B).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
HTG × 3
Heptyl 1-Thio-Beta-D-Glucopyranoside
PDB codes:
3ejb
(B),
3ejd
(B),
3eje
(B).