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Ligand clusters for UniProt code P52704

Ligand clusters for P52704: (S)-hydroxynitrile lyase from Hevea brasiliensis

Top 6 (of 11) ligand clusters
Cluster 1.
10 ligand types
13 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
3 ligands
Cluster 4.
1 ligand type
12 ligands
Cluster 5.
1 ligand type
12 ligands
Cluster 6.
1 ligand type
19 ligands
Representative protein: 1qj4A  
JSmol
 

Structures

PDB   Schematic diagram
1qj4A    
5yasA    
3c6yA    
3yasA    
7yasA    
 more ...

 

 Cluster 1 contains 10 ligand types

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Ligand Description


 
1. Ligand: ACN × 2
Acetone
PDB codes: 1sck(A), 3yas(A).


 
2. Ligand: CNH × 2
2-Hydroxy-2-Methylpropanenitrile
PDB codes: 1sc9(A), 1scq(A).


 
3. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 1qj4(A), 7yas(A).


 
4. Ligand: IPA × 1
isopropyl alcohol
Isopropyl alcohol
PDB code: 3c6z(A).


 
5. Ligand: ICN × 1
(S)-2-Hydroxy-2,3-Dimethylbutanenitrile
PDB code: 1yb7(A).


 
6. Ligand: MNN × 1
(S)-Mandelic acid nitrile
PDB code: 1yb6(A).


 
7. Ligand: CLX × 1
Tri-Chloro-Acetaldehyde
PDB code: 4yas(A).


 
8. Ligand: FAC × 1
1,1,1,3,3,3-Hexafluoropropanediol
PDB code: 5yas(A).


 
9. Ligand: HIS × 1
PDB code: 1yas(A).


 
10. Ligand: ACN × 1
Acetone
PDB code: 3c6y(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: EPE × 1
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB code: 7yas(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: PEG × 3
Di(hydroxyethyl)ether
PDB codes: 3c6x(A), 3c6y(A), 3c6z(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 12
Sulfate ion
PDB codes: 1qj4(A), 1sc9(A), 1sci(A), 1sck(A), 1scq(A), 1yb6(A), 1yb7(A), 2yas(A), 3yas(A), 4yas(A), 5yas(A), 7yas(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 12
Sulfate ion
PDB codes: 1qj4(A), 1sci(A), 1sck(A), 1scq(A), 1yb7(A), 2yas(A), 3c6x(A), 3c70(A), 3yas(A), 4yas(A), 5yas(A), 7yas(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 19
Sulfate ion
PDB codes: 1qj4(A), 1sc9(A), 1sci(A), 1sck(A), 1scq(A), 1yas(A), 1yb6(A), 1yb7(A), 2g4l(A), 2yas(A), 3c6x(A), 3c6y(A), 3c6z(A), 3c70(A), 3yas(A), 4yas(A), 5yas(A), 6yas(A), 7yas(A).

 

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