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Ligand clusters for UniProt code P52298

Ligand clusters for P52298: Nuclear cap-binding protein subunit 2 from Homo sapiens

Top 6 (of 8) ligand clusters
Cluster 1.
5 ligand types
8 ligands
Cluster 2.
1 ligand type
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5oobB  
JSmol
 

Structures

PDB   Schematic diagram
5oobB    
5oo6B    
6d0yA    
1h2uX    
1h2tZ    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 1n52(B),


 
2. Ligand: GDP-7MG × 2
GDP=Guanosine-5'-Diphosphate, 7MG=7n-Methyl-8-Hydroguanosine-5'-Monophosphate.
PDB codes: 1h2t(Z), 1h2u(X).


 
3. Ligand: MGT × 2
7n-Methyl-8-Hydroguanosine-5'-Triphosphate
PDB codes: 5oo6(B), 5oob(B).


 
4. Ligand: GTA × 1
P1-7-Methylguanosine-P3-Adenosine-5',5'-Triphosphate
PDB code: 6d0y(A).


 
5. Ligand: GTG × 1
7-Methyl-Guanosine-5'-Triphosphate-5'-Guanosine
PDB code: 1n52(B).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 3
glycerin
Glycerol
PDB codes: 1n52(B), 1n54(B).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1n52(B).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1n52(B).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1n54(B).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1n54(B).

 

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