Ligand clusters for UniProt code P50743

Ligand clusters for P50743: GTPase Der from Bacillus subtilis (strain 168)

		Top 6 (of 7) ligand clusters Cluster 1. 3 ligand types 7 ligands Cluster 2. 4 ligand types 9 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 5m7hA

Structures

PDB		Schematic diagram
5m7hA
4dcuA
4dcvA
4dctA
2hjgA
		more ...

Cluster 1 contains 3 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GDP × 5 Guanosine-5'-Diphosphate PDB codes: 2hjg(A), 4dcs(A), 4dct(A), 4dcu(A), 5mbs(A).
		2. Ligand: GCP × 1 Phosphomethylphosphonic acid guanylate ester PDB code: 4dcv(A).
		3. Ligand: GNP × 1 Phosphoaminophosphonic acid-Guanylate ester PDB code: 5m7h(A).

Cluster 2 contains 4 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GDP × 4 Guanosine-5'-Diphosphate PDB codes: 2hjg(A), 4dcu(A), 5x4b(A),
		2. Ligand: PO4 × 2 Phosphate ion PDB codes: 5m7h(A),
		3. Ligand: SO4 × 2 Sulfate ion PDB codes: 4dcs(A), 5mbs(A).
		4. Ligand: GDP-SO4 × 1 GDP=Guanosine-5'-Diphosphate, SO4=Sulfate ion. PDB code: 4dct(A).

Cluster 3 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
_Zn		1. Metal: _ZN × 1 PDB code: 2hjg(A).

Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
__K		1. Metal: __K × 1 PDB code: 5m7h(A).

Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
__K		1. Metal: __K × 1 PDB code: 5x4b(A).

Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
_Na		1. Metal: _NA × 1 PDB code: 5x4b(B).