Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P50172
Ligand clusters for P50172: Corticosteroid 11-beta-dehydrogenase isozyme 1 from Mus musculus
6 ligand clusters
Cluster 1.
10 ligand types
15 ligands
Cluster 2.
4 ligand types
4 ligands
Cluster 3.
1 ligand type
5 ligands
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 1y5mA
Structures
PDB
Schematic diagram
1y5m
A
1y5r
A
5pgz
A
4k26
A
4nmh
A
more ...
Cluster 1 contains 10 ligand types
Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
NDP × 2
Nadph dihydro-Nicotinamide-Adenine-Dinucleotide phosphate
PDB codes:
1y5m
(A),
1y5r
(A).
2. Ligand:
C0R × 1
Corticosterone
PDB code:
1y5r
(A).
3. Ligand:
OCT × 1
N-Octane
PDB code:
1y5m
(A).
4. Ligand:
NDP × 3
Nadph dihydro-Nicotinamide-Adenine-Dinucleotide phosphate
PDB codes:
3gmd
(A),
4k26
(A),
4nmh
(A).
5. Ligand:
HJG × 2
2-{3-[1-(4-Chlorophenyl)cyclopropyl][1,2,4]triazolo[4, 3-A]pyridin-8-Yl}propan-2-Ol
PDB codes:
5qij
(A),
6. Ligand:
NAP × 2
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB codes:
5pgz
(A),
5qij
(A).
7. Ligand:
2KG × 1
(4s)-4-(2-Methoxyphenyl)-3,3-Dimethyl-1-[3- (Methylsulfonyl)phenyl]azetidin-2-One
PDB code:
4nmh
(A).
8. Ligand:
2M3 × 1
2-Methyl-3-{(3s)-1-[(1-Pyridin-2-Ylcyclopropyl) carbonyl]pyrrolidin-3-Yl}-1h-Pyrrolo[2,3-B]pyridine
PDB code:
3gmd
(A).
9. Ligand:
8KG × 1
2-[(5r,7s)-6-Hydroxy-2-Phenyladamantan-2-Yl]-1-(3- Hydroxyazetidin-1-Yl)ethan-1-One
PDB code:
5pgz
(A).
10. Ligand:
SFF × 1
(4as,8ar)-N-Cyclohexyl-4a,5,6,7,8,8a-Hexahydro-4,1,2- Benzoxathiazin-3-Amine 1,1-Dioxide
PDB code:
4k26
(A).
Cluster 2 contains 4 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
OCT × 1
N-Octane
PDB code:
1y5m
(A).
2. Ligand:
2KG × 1
(4s)-4-(2-Methoxyphenyl)-3,3-Dimethyl-1-[3- (Methylsulfonyl)phenyl]azetidin-2-One
PDB code:
4nmh
(A).
3. Ligand:
2M3 × 1
2-Methyl-3-{(3s)-1-[(1-Pyridin-2-Ylcyclopropyl) carbonyl]pyrrolidin-3-Yl}-1h-Pyrrolo[2,3-B]pyridine
PDB code:
3gmd
(A).
4. Ligand:
HJG × 1
2-{3-[1-(4-Chlorophenyl)cyclopropyl][1,2,4]triazolo[4, 3-A]pyridin-8-Yl}propan-2-Ol
PDB code:
5qij
(A).
Cluster 3 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
SO4 × 5
Sulfate ion
PDB codes:
1y5m
(A),
4k26
(A),
4nmh
(A),
5pgz
(A),
5qij
(A).
Cluster 4 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
SO4 × 3
Sulfate ion
PDB codes:
1y5m
(A),
4k26
(A),
5qij
(A).
Cluster 5 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
5pgz
(A),
5qij
(A).
Cluster 6 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
5pgz
(A),
5qij
(A).