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EBI
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PDBsum
Ligand clusters for UniProt code P49711
Ligand clusters for P49711: Transcriptional repressor CTCF from Homo sapiens
Top 6 (of 16) ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
2 ligand types
13 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
9 ligands
Cluster 6.
1 ligand type
11 ligands
Representative protein: 5undA
Structures
PDB
Schematic diagram
5und
A
5und
B
5yeg
A
5yeh
A
5yef
A
more ...
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5und
(B).
_Zn
2. Metal:
_ZN × 1
PDB code:
5k5i
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 12
PDB codes:
5k5h
(A),
5k5i
(A),
5k5j
(A),
5kkq
(A),
5t00
(A),
5t0u
(A),
5und
(A),
5yef
(A),
5yeg
(A),
5yeh
(A),
5yel
(A).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5und
(B).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
5k5i
(A),
5k5j
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACT × 1
Acetate ion
PDB code:
5k5j
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 9
PDB codes:
5k5h
(A),
5kkq
(A),
5t00
(A),
5t0u
(A),
5und
(A),
5yef
(A),
5yeg
(A),
5yeh
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 11
PDB codes:
5k5h
(A),
5k5i
(A),
5k5j
(A),
5kkq
(A),
5t00
(A),
5t0u
(A),
5und
(A),
5yef
(A),
5yeg
(A),
5yeh
(A).