Ligand clusters for UniProt code P42866

Ligand clusters for P42866: Mu-type opioid receptor from Mus musculus

		Top 6 (of 18) ligand clusters Cluster 1. 3 ligand types 4 ligands Cluster 2. 2 ligand types 4 ligands Cluster 3. 2 ligand types 2 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 4dklA

Structures

PDB		Schematic diagram
4dklA
6ddeR
5c1mA
6ddfR

Cluster 1 contains 3 ligand types

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Ligand		Description
		1. Ligand: TYR-DAL-GLY-MEA-ETA × 2 DAL=D-Alanine, MEA=N-Methylphenylalanine, ETA=Ethanolamine. PDB codes: 6dde(R), 6ddf(R).
		2. Ligand: BF0 × 1 Methyl 4-{[(5beta,6alpha)-17-(Cyclopropylmethyl)-3,14- Dihydroxy-4,5-Epoxymorphinan-6-Yl]amino}-4- Oxobutanoate PDB code: 4dkl(A).
		3. Ligand: VF1 × 1 (2r,3s,3ar,5ar,6r,11br,11cs)-3a-Methoxy-3,14-Dimethyl- 2-Phenyl-2,3,3a,6,7,11c-Hexahydro-1h-6,11b- (Epiminoethano)-3,5a-Methanonaphtho[2,1-G]indol-10-Ol PDB code: 5c1m(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: CLR × 2 cholesterol Cholesterol PDB codes: 4dkl(A), 5c1m(A).
		2. Ligand: OLC × 2 (2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate PDB codes: 5c1m(A),

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: MPG × 1 [(Z)-Octadec-9-Enyl] (2r)-2,3-Bis(oxidanyl)propanoate PDB code: 4dkl(A).
		2. Ligand: P6G × 1 Hexaethylene glycol PDB code: 5c1m(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: MPG × 1 [(Z)-Octadec-9-Enyl] (2r)-2,3-Bis(oxidanyl)propanoate PDB code: 4dkl(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: P6G × 1 Hexaethylene glycol PDB code: 5c1m(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: 1PE × 1 Pentaethylene glycol PDB code: 4dkl(A).