Ligand clusters for UniProt code P42568

Ligand clusters for P42568: Protein AF-9 from Homo sapiens

		6 ligand clusters Cluster 1. 9 ligand types 9 ligands Cluster 2. 3 ligand types 3 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 2 ligand types 3 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 5hjbA

Structures

PDB		Schematic diagram
5hjbA
4tmpA
6milA
5yyfA
6ls6A
		more ...

Cluster 1 contains 9 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: EDX-ALO-ALA-EE0-EE3-NH2 × 1 EDX=(2~{s})-6-Carbamimidamido-2- (Phenylmethoxycarbonylamino)hexanoic acid, ALO=Allo-Threonine, EE0=(2~{r})-2-Azanylpentanoic acid, EE3=(2~{s})-2-Azanyl-6-(1,3-Oxazol-5-Ylcarbonylamino) hexanoic acid, NH2=Amino group. PDB code: 6l5z(A).
		2. Ligand: FOA × 1 2-Furoic acid PDB code: 5yyf(A).
		3. Ligand: GLN-THR-ALA-ARG-KCR-SER × 1 KCR=N-6-Crotonyl-L-Lysine. PDB code: 6mim(A).
		4. Ligand: LYS-ALA-PRO-ARG-KCR-GLN-LEU × 1 KCR=N-6-Crotonyl-L-Lysine. PDB code: 5hjd(A).
		5. Ligand: LYS-GLN-THR-ALA-ARG-BTK-SER × 1 BTK=N~6~-Butanoyl-L-Lysine. PDB code: 6mil(A).
		6. Ligand: PHQ-GLN-THR-ALA-ARG-LYS-NH2 × 1 PHQ=Benzyl chlorocarbonate, NH2=Amino group. PDB code: 5yyf(A).
		7. Ligand: THR-LYS-GLN-THR-ALA-ARG-ALY-SER-THR × 1 ALY=N(6)-Acetyllysine. PDB code: 4tmp(A).
		8. Ligand: THR-LYS-GLN-THR-ALA-ARG-KCR-SER × 1 KCR=N-6-Crotonyl-L-Lysine. PDB code: 5hjb(A).
		9. Ligand: THR-LYS-GLN-THR-ALA-ARG-LBZ-SER × 1 LBZ=(2~{s})-2-Azanyl-6-Benzamido-Hexanoic acid. PDB code: 6ls6(A).

Cluster 2 contains 3 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: PHQ-GLN-THR-ALA-ARG-LYS-NH2 × 1 PHQ=Benzyl chlorocarbonate, NH2=Amino group. PDB code: 5yyf(A).
		2. Ligand: SO4 × 1 Sulfate ion PDB code: 5hjd(A).
		3. Ligand: THR-LYS-GLN-THR-ALA-ARG-LBZ-SER × 1 LBZ=(2~{s})-2-Azanyl-6-Benzamido-Hexanoic acid. PDB code: 6ls6(A).

Cluster 3 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GLN-THR-ALA-ARG-KCR-SER × 1 KCR=N-6-Crotonyl-L-Lysine. PDB code: 6mim(A).

Cluster 4 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: SO4 × 2 Sulfate ion PDB codes: 5hjd(A), 5yyf(A).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 4tmp(A).

Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 5yyf(A).

Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
_Cu		1. Metal: _CU × 1 PDB code: 5hjd(A).