Ligand clusters for UniProt code P42530

Ligand clusters for P42530: Discoidin-2 from Dictyostelium discoideum

		Top 6 (of 11) ligand clusters Cluster 1. 4 ligand types 4 ligands Cluster 2. 4 ligand types 4 ligands Cluster 3. 2 ligand types 3 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 2 ligand types 2 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 2vmeA

Structures

PDB		Schematic diagram
2vmeA
2vmdA
2vm9A
2vmcA

Cluster 1 contains 4 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 2vme(A).
		2. Ligand: A2G-NGA × 1 A2G=2-Acetamido-2-Deoxy-Alpha-D-Galactopyranose, NGA=2-Acetamido-2-Deoxy-Beta-D-Galactopyranose. PDB code: 2vmc(A).
		3. Ligand: MBG × 1 Methyl beta-D-Galactopyranoside PDB code: 2vmd(A).
_Cl		4. Metal: _CL × 1 PDB code: 2vm9(A).

Cluster 2 contains 4 ligand types

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Ligand		Description
		1. Ligand: 1PG × 1 2-(2-{2-[2-(2-Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)- Ethanol PDB code: 2vmc(A).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 2vmd(A).
		3. Ligand: MPD × 1 (4s)-2-Methyl-2,4-Pentanediol PDB code: 2vm9(A).
		4. Ligand: PO4 × 1 Phosphate ion PDB code: 2vm9(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 2vme(A).
		2. Ligand: 1PG × 2 2-(2-{2-[2-(2-Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)- Ethanol PDB codes: 2vmc(A), 2vmd(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: 1PG × 1 2-(2-{2-[2-(2-Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)- Ethanol PDB code: 2vmd(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 2vmc(A).
		2. Ligand: PO4 × 1 Phosphate ion PDB code: 2vm9(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: MPD × 1 (4s)-2-Methyl-2,4-Pentanediol PDB code: 2vm9(A).