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EBI
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PDBsum
Ligand clusters for UniProt code P41597
Ligand clusters for P41597: C-C chemokine receptor type 2 from Homo sapiens
Top 6 (of 15) ligand clusters
Cluster 1.
3 ligand types
5 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
4 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5t1aA
Structures
PDB
Schematic diagram
5t1a
A
6gpx
A
6gps
A
6gpx
B
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
F7N × 3
[(3~{s},4~{s})-3-Methoxyoxan-4-Yl]-[(1~{r},3~{s})-3- Propan-2-Yl-3-[[3-(Trifluoromethyl)-7,8-
Dihydro-5~{h}- 1,6-Naphthyridin-6-Yl]carbonyl]cyclopentyl]azanium
PDB codes:
6gps
(A),
6gpx
(A),
2. Ligand:
73R × 1
(3s)-1-{(1s,2r,4r)-4-[Methyl(propan-2-Yl)amino]-2- Propylcyclohexyl}-3-{[6-
(Trifluoromethyl)quinazolin-4- Yl]amino}pyrrolidin-2-One
PDB code:
5t1a
(A).
3. Ligand:
OLA × 1
Oleic acid
PDB code:
6gpx
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
OLA × 1
Oleic acid
PDB code:
6gpx
(A).
2. Ligand:
OLC × 1
(2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB code:
5t1a
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
VT5 × 1
(2~{r})-1-(4-Chloranyl-2-Fluoranyl-Phenyl)-2- Cyclohexyl-3-Ethanoyl-4-Oxidanyl-2~{h}-Pyrrol-5-One
PDB code:
5t1a
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
OLA × 3
Oleic acid
PDB codes:
6gpx
(A),
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
OLA × 4
Oleic acid
PDB codes:
6gpx
(A),
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
OLA × 1
Oleic acid
PDB code:
6gpx
(A).