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Ligand clusters for UniProt code P41594

Ligand clusters for P41594: Metabotropic glutamate receptor 5 from Homo sapiens

5 ligand clusters
Cluster 1.
4 ligand types
8 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
1 ligand type
6 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
1 ligand
Representative protein: 6n51B  
JSmol
 

Structures

PDB   Schematic diagram
6n51B    
6n52A    
6n4xA    
6n4yC    
6n4yA    
 more ...

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: NAG × 5
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 3lmk(A), 6n4x(A), 6n50(A), 6n51(B), 6n52(A).


 
2. Ligand: NAG-NAG-BMA-MAN-FUC × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 6n4y(C).


 
3. Ligand: NAG-NAG-BMA-MAN-MAN-FUC-FUC × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 6n4y(C).


 
4. Ligand: NAG-NAG-FUC × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose.
PDB code: 6n4y(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: QUS × 3
(S)-2-Amino-3-(3,5-Dioxo-[1,2,4]oxadiazolidin-2-Yl)- Propionic acid
PDB codes: 6n50(A), 6n51(B).


 
2. Ligand: GLU × 1
PDB code: 3lmk(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 6
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 6n4x(A), 6n4y(C), 6n50(A), 6n51(B), 6n52(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 6n4x(A), 6n4y(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code: 6n4x(A).

 

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