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Ligand clusters for UniProt code P41180

Ligand clusters for P41180: Extracellular calcium-sensing receptor from Homo sapiens

Top 6 (of 12) ligand clusters
Cluster 1.
3 ligand types
6 ligands
Cluster 2.
2 ligand types
7 ligands
Cluster 3.
2 ligand types
5 ligands
Cluster 4.
3 ligand types
5 ligands
Cluster 5.
1 ligand type
5 ligands
Cluster 6.
1 ligand type
8 ligands
Representative protein: 7dttA  
JSmol
 

Structures

PDB   Schematic diagram
7dttA    
7dtwA    
7dtvA    
7dtuA    
5k5tA    
 more ...

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 5k5s(A), 5k5t(A).


 
2. Ligand: NAG-NAG × 2
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 7dtu(A), 7dtw(A).


 
3. Ligand: NAG-NAG-NAG × 2
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 7dtt(A), 7dtv(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 3
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 5fbk(A), 5k5s(A), 5k5t(A).


 
2. Ligand: NAG-NAG × 4
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 7dtt(A), 7dtu(A), 7dtv(A), 7dtw(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: TRP × 3
PDB codes: 5k5s(A), 7dtu(A), 7dtv(A).


 
2. Ligand: TCR × 2
Cyclomethyltryptophan
PDB codes: 5fbh(B), 5fbk(A).

 

 Cluster 4 contains 3 ligand types

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Ligand Description


 
1. Ligand: BCT × 2
Bicarbonate ion
PDB codes: 5fbh(B), 5fbk(A).


 
2. Ligand: SO4 × 2
Sulfate ion
PDB codes: 5k5t(A),


 
3. Ligand: PO4 × 1
Phosphate ion
PDB code: 5k5s(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 5
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 5fbh(B), 5fbk(A), 5k5t(A), 7dtt(A), 7dtv(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 8
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 5fbh(B), 5fbk(A), 5k5s(A), 5k5t(A), 7dtt(A), 7dtu(A), 7dtv(A), 7dtw(A).

 

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