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EBI
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PDBsum
Ligand clusters for UniProt code P41180
Ligand clusters for P41180: Extracellular calcium-sensing receptor from Homo sapiens
Top 6 (of 12) ligand clusters
Cluster 1.
3 ligand types
6 ligands
Cluster 2.
2 ligand types
7 ligands
Cluster 3.
2 ligand types
5 ligands
Cluster 4.
3 ligand types
5 ligands
Cluster 5.
1 ligand type
5 ligands
Cluster 6.
1 ligand type
8 ligands
Representative protein: 7dttA
Structures
PDB
Schematic diagram
7dtt
A
7dtw
A
7dtv
A
7dtu
A
5k5t
A
more ...
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
5k5s
(A),
5k5t
(A).
2. Ligand:
NAG-NAG × 2
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes:
7dtu
(A),
7dtw
(A).
3. Ligand:
NAG-NAG-NAG × 2
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes:
7dtt
(A),
7dtv
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG × 3
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
5fbk
(A),
5k5s
(A),
5k5t
(A).
2. Ligand:
NAG-NAG × 4
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes:
7dtt
(A),
7dtu
(A),
7dtv
(A),
7dtw
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
TRP × 3
PDB codes:
5k5s
(A),
7dtu
(A),
7dtv
(A).
2. Ligand:
TCR × 2
Cyclomethyltryptophan
PDB codes:
5fbh
(B),
5fbk
(A).
Cluster 4 contains 3 ligand types
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Ligand
Description
1. Ligand:
BCT × 2
Bicarbonate ion
PDB codes:
5fbh
(B),
5fbk
(A).
2. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
5k5t
(A),
3. Ligand:
PO4 × 1
Phosphate ion
PDB code:
5k5s
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 5
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
5fbh
(B),
5fbk
(A),
5k5t
(A),
7dtt
(A),
7dtv
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 8
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
5fbh
(B),
5fbk
(A),
5k5s
(A),
5k5t
(A),
7dtt
(A),
7dtu
(A),
7dtv
(A),
7dtw
(A).