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EBI
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Ligand clusters for UniProt code P40871
Ligand clusters for P40871: 2,3-dihydroxybenzoate-AMP ligase from Bacillus subtilis (strain 168)
4 ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 1md9A
Structures
PDB
Schematic diagram
1md9
A
1mdf
A
1mdb
A
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
AMP × 1
Adenosine monophosphate
PDB code:
1md9
(A).
2. Ligand:
AMP-DBH × 1
AMP
=Adenosine monophosphate,
DBH
=2,3-Dihydroxy-Benzoic acid.
PDB code:
1mdb
(A).
3. Ligand:
DBH × 1
2,3-Dihydroxy-Benzoic acid
PDB code:
1md9
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
1mdb
(A),
1mdf
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1mdb
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1mdf
(A).