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Ligand clusters for UniProt code P38894

Ligand clusters for P38894: Flocculation protein FLO5 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Top 6 (of 14) ligand clusters
Cluster 1.
8 ligand types
16 ligands
Cluster 2.
4 ligand types
31 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
7 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 2xjpA  
JSmol
 

Structures

PDB   Schematic diagram
2xjpA    
2xjvA    
2xjqA    
4ai0A    
4ahzA    
 more ...

 

 Cluster 1 contains 8 ligand types

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Ligand Description

_Gd
 
1. Metal: _GD × 8
PDB codes: 4ahw(A), 4ahx(A), 4ahy(A), 4ahz(A), 4ai0(A), 4ai1(A), 4ai2(A), 4ai3(A).


 
2. Ligand: MAN-MAN × 2
MAN=Alpha-D-Mannopyranose.
PDB codes: 2xjs(A), 2xju(A).


 
3. Ligand: BGC × 1
Beta-D-Glucopyranose
PDB code: 2xjv(A).


 
4. Ligand: BMA × 1
Beta-D-Mannopyranose
PDB code: 2xjp(A).


 
5. Ligand: BMA-MAN-MAN × 1
BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 2xjt(A).


 
6. Ligand: MAN × 1
Alpha-D-Mannopyranose
PDB code: 2xjp(A).


 
7. Ligand: MAN-MAN-MAN-MAN × 1
MAN=Alpha-D-Mannopyranose.
PDB code: 2xjr(A).

_Na
 
8. Metal: _NA × 1
PDB code: 2xjq(A).

 

 Cluster 2 contains 4 ligand types

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Ligand Description

_Gd
 
1. Metal: _GD × 28
PDB codes: 4ahw(A), 4ahx(A), 4ahz(A), 4ai0(A), 4ai1(A), 4ai2(A), 4ai3(A),


 
2. Ligand: ACT × 1
Acetate ion
PDB code: 4ahx(A).


 
3. Ligand: BGC × 1
Beta-D-Glucopyranose
PDB code: 2xjv(A).


 
4. Ligand: BMA × 1
Beta-D-Mannopyranose
PDB code: 2xjp(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2xjq(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2xjq(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 7
glycerin
Glycerol
PDB codes: 2xjq(A), 2xjr(A), 2xjt(A), 2xju(A), 4ai1(A), 4ai2(A), 4ai3(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2xjq(A).

 

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