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EBI
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PDBsum
Ligand clusters for UniProt code P38698
Ligand clusters for P38698: Exopolyphosphatase from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
6 ligand clusters
Cluster 1.
7 ligand types
9 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 2qb6A
Structures
PDB
Schematic diagram
2qb6
A
2qb8
A
2qb7
A
Cluster 1 contains 7 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
2qb8
(A).
_Mn
2. Metal:
_MN × 1
PDB code:
2qb6
(A).
3. Ligand:
PO4 × 3
Phosphate ion
PDB codes:
2qb7
(A),
4. Ligand:
ACT × 1
Acetate ion
PDB code:
2qb7
(A).
5. Ligand:
ATP × 1
Adenosine-5'-Triphosphate
PDB code:
2qb8
(A).
6. Ligand:
SO4 × 1
Sulfate ion
PDB code:
2qb6
(A).
_Co
7. Metal:
_CO × 1
PDB code:
2qb7
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
2qb6
(A).
2. Ligand:
ACT × 1
Acetate ion
PDB code:
2qb7
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
2qb6
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACT × 1
Acetate ion
PDB code:
2qb6
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
2qb6
(A),
2qb7
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
2qb6
(A).