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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P36238
Ligand clusters for P36238: 50S ribosomal protein L11 from Thermus thermophilus
5 ligand clusters
Cluster 1.
3 ligand types
11 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 3cjtF
Structures
PDB
Schematic diagram
3cjt
F
3cjt
B
3cjq
B
3cjq
E
3cjs
B
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
2MM × 4
N,N-Dimethyl-L-Methionine
PDB codes:
3cjq
(B),
3cjt
(B),
2. Ligand:
NO3 × 4
Nitrate ion
PDB codes:
3cjt
(B),
3. Ligand:
SAH × 3
S-Adenosyl-L-Homocysteine
PDB codes:
3cjq
(B),
3cjt
(F).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
3cjs
(B).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
3cjs
(B).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
3cjs
(B).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
3cjt
(B).