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EBI
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PDBsum
Ligand clusters for UniProt code P35520
Ligand clusters for P35520: Cystathionine beta-synthase from Homo sapiens
Top 6 (of 20) ligand clusters
Cluster 1.
2 ligand types
12 ligands
Cluster 2.
2 ligand types
7 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
2 ligand types
10 ligands
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4l3vB
Structures
PDB
Schematic diagram
4l3v
B
4l28
A
4coo
A
4l0d
A
4l27
B
more ...
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
HEM × 11
Protoporphyrin IX containing fe
PDB codes:
1jbq
(A),
1m54
(A),
4coo
(A),
4l0d
(A),
4l27
(B),
4l28
(A),
4l3v
(B),
4pcu
(A),
5mms
(A),
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4coo
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
SAM × 4
ademetionine
S-Adenosylmethionine
PDB codes:
4uuu
(A),
2. Ligand:
EDO × 3
1,2-Ethanediol
PDB codes:
4uuu
(A),
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
SAM × 2
ademetionine
S-Adenosylmethionine
PDB codes:
4pcu
(A),
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
PLP × 9
pyridoxal phosphate
Pyridoxal-5'-Phosphate
PDB codes:
1jbq
(A),
1m54
(A),
4coo
(A),
4l0d
(A),
4l27
(B),
4l28
(A),
4l3v
(B),
4pcu
(A),
5mms
(A).
2. Ligand:
ACT × 1
Acetate ion
PDB code:
4coo
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
ACT × 1
Acetate ion
PDB code:
4coo
(A).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4coo
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
PE4 × 1
2-{2-[2-(2-{2-[2-(2-Ethoxy-Ethoxy)-Ethoxy]- Ethoxy}-Ethoxy)-Ethoxy]-Ethoxy}-Ethanol
PDB code:
4coo
(A).